Annotation Overview for fig|670892.3.peg.5153 in Escherichia coli 3431:
Branched-chain amino acid ABC transporter, permease protein LivM

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current assignmentBranched-chain amino acid ABC transporter, permease protein LivM
taxonomy id670892contig
internal linksgenome browser | feature evidence | sequenceACH [?]show essentially identical genes
PubMed links2195019
annotation historyrun tool
FigFamFIG00005172CDD linkshow cdd
PATtyfamPGF_00412668: Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)
PLF_561_00000910: Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)
alignments and trees14 alignments and treesPATRIC link47873078
edit functional roleBranched-chain amino acid ABC transporter, permease protein LivM
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This feature is part of a subsystem
  • In Leucine, Isoleucine, and Valine biosynthesis PanGenomes its role is Branched-chain amino acid ABC transporter, permease protein LivM (TC 3.A.1.4.1). However, the functionality of this subsystem has not yet been classified for this organism.
  • In ABC transporter branched-chain amino acid (TC 3.A.1.4.1) its role is Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1).
  • Reasons for Current Assignment

    We have assigned the function "Branched-chain amino acid ABC transporter, permease protein LivM" to the encoded protein. The function of this gene is asserted in 2195019.

    Compare Regions For fig|670892.3.peg.5153

    The chromosomal region of the focus gene (top) is compared with four similar organisms. The graphic is centered on the focus gene, which is red and numbered 1. Sets of genes with similar sequence are grouped with the same number and color. Genes whose relative position is conserved in at least four other species are functionally coupled and share gray background boxes. The size of the region and the number of genomes may be reset. Click on any arrow in the display to refocus the comparison on that gene. The focus gene always points to the right, even if it is located on the minus strand.