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The Annotation Clearinghouse offers a mapping of genes which are identical in sequence except for the start region (due to differences in start calling).
Set function to
putative Threonine ammonia-lyase
from original annotations
5/1/2010
rapid_propogation
Set function to
putative Threonine ammonia-lyase( EC:4.3.1.19 )
based on unreliable automated assignments
8/3/2010
pseed_update_rel28
Set master function to
Threonine dehydratase (EC 4.3.1.19)
4/12/2014
annotation_transfer
Migrating 2 annotations for fig|488538.3.peg.525 from core seed (including function assignment) at 2014-04-12 01:15:17
4/12/2014
SvetaG
Migrate assignment from Threonine dehydratase (EC 4.3.1.19) to Threonine dehydratase, catabolic (EC 4.3.1.19) @ L-serine dehydratase, (PLP)-dependent (EC 4.3.1.17)
4/12/2014
SvetaG
Assignment projected from fig|83333.1.peg.3063 based on tree proximity
4/12/2014
SvetaG
Set master function to
Threonine dehydratase, catabolic (EC 4.3.1.19) @ L-serine dehydratase, (PLP)-dependent (EC 4.3.1.17)
This feature is part of a subsystem
In Threonine degradation its role is Threonine dehydratase (EC 4.3.1.19).
In Branched-Chain Amino Acid Biosynthesis its role is Threonine dehydratase (EC 4.3.1.19).
In RidA family in 981 representative prokaryotes its role is Threonine dehydratase, catabolic (EC 4.3.1.19).
In RidA family in 981 representative prokaryotes its role is L-serine dehydratase, (PLP)-dependent (EC 4.3.1.17).
In TN RidA: all subgroups, 981 genomes PLP its role is Threonine dehydratase, catabolic (EC 4.3.1.19). However, the functionality of this subsystem has not yet been classified for this organism.
In TN RidA: all subgroups, 981 genomes PLP its role is L-serine dehydratase, (PLP)-dependent (EC 4.3.1.17). However, the functionality of this subsystem has not yet been classified for this organism.
In GB RidA family in 981 representative prokaryotes its role is Threonine dehydratase, catabolic (EC 4.3.1.19).
In GB RidA family in 981 representative prokaryotes its role is L-serine dehydratase, (PLP)-dependent (EC 4.3.1.17).
In COG2945 its role is Threonine dehydratase, catabolic (EC 4.3.1.19).
In COG2945 its role is L-serine dehydratase, (PLP)-dependent (EC 4.3.1.17).
In Branched-Chain Amino Acid Biosynthesis its role is Threonine dehydratase (EC 4.3.1.19).
In Threonine degradation its role is Threonine dehydratase (EC 4.3.1.19).
Compare Regions For fig|488538.3.peg.525
The chromosomal region of the focus gene (top) is compared with four similar organisms. The graphic is centered on the focus gene, which is red and numbered 1. Sets of genes with similar sequence are grouped with the same number and color. Genes whose relative position is conserved in at least four other species are functionally coupled and share gray background boxes. The size of the region and the number of genomes may be reset. Click on any arrow in the display to refocus the comparison on that gene. The focus gene always points to the right, even if it is located on the minus strand.
