Annotation Overview for fig|347834.17.peg.349 in Rhizobium etli CFN 42:
Tryptophan synthase beta chain (EC 4.2.1.20)

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current assignmentTryptophan synthase beta chain (EC 4.2.1.20)EC Number 4.2.1.20
taxonomy id347834contig
internal linksgenome browser | feature evidence | sequenceACH [?]show essentially identical genes
PubMed links10517032
annotation historyrun tool
FigFamFIG00116323CDD linkshow cdd
PATtyfamPGF_00062027: Tryptophan synthase beta chain (EC 4.2.1.20)
PLF_379_00000246: Tryptophan synthase beta chain (EC 4.2.1.20)
alignments and trees7 alignments and treesPATRIC link23081314
edit functional roleTryptophan synthase beta chain (EC 4.2.1.20)
aliases
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This feature is part of a subsystem
  • In Tryptophan synthesis Chlora tempo its role is Tryptophan synthase beta chain (EC 4.2.1.20).
  • In Tryptophan synthesis its role is Tryptophan synthase beta chain (EC 4.2.1.20).
  • In EC 4.2.1.1-25 Hydro-lyases its role is Tryptophan synthase beta chain (EC 4.2.1.20). However, the functionality of this subsystem has not yet been classified for this organism.
  • In Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more. its role is Tryptophan synthase beta chain (EC 4.2.1.20). However, this subsystem has been classified as not being functional in this organism.
  • In Folate Tryp Chlamydiae its role is Tryptophan synthase beta chain (EC 4.2.1.20). However, this subsystem has been classified as not being functional in this organism.
  • In Tryptophan synthesis its role is Tryptophan synthase beta chain (EC 4.2.1.20).
  • Reasons for Current Assignment

    We have assigned the function "Tryptophan synthase beta chain (EC 4.2.1.20)" to the encoded protein. The protein occurs in 1 subsystem: "Tryptophan synthesis". The function of this gene is asserted in 10517032.

    Compare Regions For fig|347834.17.peg.349

    The chromosomal region of the focus gene (top) is compared with four similar organisms. The graphic is centered on the focus gene, which is red and numbered 1. Sets of genes with similar sequence are grouped with the same number and color. Genes whose relative position is conserved in at least four other species are functionally coupled and share gray background boxes. The size of the region and the number of genomes may be reset. Click on any arrow in the display to refocus the comparison on that gene. The focus gene always points to the right, even if it is located on the minus strand.