Annotation Overview for fig|218491.3.peg.4153 in Erwinia carotovora subsp. atroseptica SCRI1043:
Pyridoxal-phosphate dependent enzyme family protein

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current assignmentPyridoxal-phosphate dependent enzyme family protein
taxonomy id218491contig
internal linksgenome browser | feature evidence | sequenceACH [?]show essentially identical genes
annotation historyrun tool
FigFamFIG00133870CDD linkshow cdd
PATtyfamPGF_00411438: pyridoxal-phosphate dependent enzyme family protein
alignments and trees7 alignments and trees
edit functional rolePyridoxal-phosphate dependent enzyme family protein
data base cross references
(dbxref)		aliases
propagation lock
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This feature is part of a subsystem
  • In Threonine degradation its role is Threonine dehydratase, catabolic (EC 4.3.1.19).
  • In dcernst RidA Cysteine phenotype its role is Threonine dehydratase, catabolic (EC 4.3.1.19). However, the functionality of this subsystem has not yet been classified for this organism.
  • In YggSProC its role is Threonine dehydratase, catabolic (EC 4.3.1.19). However, the functionality of this subsystem has not yet been classified for this organism.
  • In TN RidA proteins its role is Threonine dehydratase, catabolic (EC 4.3.1.19). However, the functionality of this subsystem has not yet been classified for this organism.
  • In dcernst RidA proteins its role is Threonine dehydratase, catabolic (EC 4.3.1.19). However, the functionality of this subsystem has not yet been classified for this organism.
  • In Glycine and Serine Utilization its role is Threonine dehydratase, catabolic (EC 4.3.1.19).
  • In Branched-Chain Amino Acid Biosynthesis its role is Threonine dehydratase, catabolic (EC 4.3.1.19).
  • In TN RidA: all subgroups, 981 genomes PLP its role is Threonine dehydratase, catabolic (EC 4.3.1.19). However, the functionality of this subsystem has not yet been classified for this organism.
  • In TN RidA: all subgroups, 981 genomes PLP its role is L-serine dehydratase, (PLP)-dependent (EC 4.3.1.17). However, the functionality of this subsystem has not yet been classified for this organism.
  • In RidA proteins copy with new groups its role is Threonine dehydratase, catabolic (EC 4.3.1.19). However, the functionality of this subsystem has not yet been classified for this organism.
  • In RidA proteins its role is Threonine dehydratase, catabolic (EC 4.3.1.19). However, the functionality of this subsystem has not yet been classified for this organism.
  • In Branched-Chain Amino Acid Biosynthesis its role is Threonine dehydratase, catabolic (EC 4.3.1.19).
  • In Glycine and Serine Utilization its role is Threonine dehydratase, catabolic (EC 4.3.1.19).
  • In Threonine degradation its role is Threonine dehydratase, catabolic (EC 4.3.1.19).

    • Reasons for Current Assignment

    We have assigned the function "Pyridoxal-phosphate dependent enzyme family protein" to the encoded protein. The protein occurs in 3 subsystems: "Branched-Chain Amino Acid Biosynthesis", "Glycine and Serine Utilization", and "Threonine degradation". The function of genes having the same functional roles have been described in Salmonella typhimurium (6751404). This is a homologous protein which implements the same function.

    Compare Regions For fig|218491.3.peg.4153

    The chromosomal region of the focus gene (top) is compared with four similar organisms. The graphic is centered on the focus gene, which is red and numbered 1. Sets of genes with similar sequence are grouped with the same number and color. Genes whose relative position is conserved in at least four other species are functionally coupled and share gray background boxes. The size of the region and the number of genomes may be reset. Click on any arrow in the display to refocus the comparison on that gene. The focus gene always points to the right, even if it is located on the minus strand.