Annotation Overview for fig|216593.1.peg.4180 in Escherichia coli E2348/69:
High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1)

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current assignmentHigh-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1)
taxonomy id216593contig
internal linksgenome browser | feature evidence | sequenceACH [?]show essentially identical genes
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FigFamFIG01304712CDD linkshow cdd
PATtyfamPGF_00011729: High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1)
PLF_561_00001007: High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1)
alignments and trees9 alignments and trees
edit functional roleHigh-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1)
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This feature is part of a subsystem
  • In ABC transporter branched-chain amino acid (TC 3.A.1.4.1) its role is High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1).
  • In Transporters In Models its role is High-affinity leucine-specific transport system, periplasmic binding protein livK (TC 3.A.1.4.1). However, the functionality of this subsystem has not yet been classified for this organism.
  • In Leucine, Isoleucine, and Valine biosynthesis PanGenomes its role is High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1). However, the functionality of this subsystem has not yet been classified for this organism.
  • In ABC transporter branched-chain amino acid (TC 3.A.1.4.1) its role is High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1).
  • Reasons for Current Assignment

    We have assigned the function "High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1)" to the encoded protein. The protein occurs in 1 subsystem: "ABC transporter branched-chain amino acid (TC 3.A.1.4.1)". In "ABC transporter branched-chain amino acid (TC 3.A.1.4.1)", it appears to play a functional role that we have not associated with any other gene, and it occurs in close proximity on the chromosome with 5 other genes from the same subsystem.

    Compare Regions For fig|216593.1.peg.4180

    The chromosomal region of the focus gene (top) is compared with four similar organisms. The graphic is centered on the focus gene, which is red and numbered 1. Sets of genes with similar sequence are grouped with the same number and color. Genes whose relative position is conserved in at least four other species are functionally coupled and share gray background boxes. The size of the region and the number of genomes may be reset. Click on any arrow in the display to refocus the comparison on that gene. The focus gene always points to the right, even if it is located on the minus strand.