NAME

svr_fids_to_ids

SYNOPSIS

svr_fids_to_ids < table.with.FID.as.last.column > extended.table

DESCRIPTION

Extend a table containing a column of FIG-IDs (FIDs) by appending a column containing a comma-separated list of other known identifiers.

Example:

    svr_fids_to_ids < table.with.FID.in.last.column > extended.table

COMMAND-LINE OPTIONS

Usage: svr_subsystem_classification [-url=URL] [-c=num] [-protein] [-natural] < table.with.FID.in.some.column > extended.table

    --help     --- Displays this document

    --url      --- Optional URL for alternate SAPLING server (D: http://pubseed.theseed.org/sapling/server.cgi)

    --c        --- Column number, if the FID is not in the last column

    --protein  --- Also return alternate IDs for every FID having the same protein sequence as this FID (D: FALSE)

    --natural  --- Return IDs in "natural" form rather than SEED type-prefixed form (D: FALSE)

Output

A table with one added columnn containing a comma-separated list of other known identifiers.

AUTHORS

The SEED Project