Documentation read from 04/17/2019 22:07:25 version of /vol/public-pseed/FIGdisk/FIG/bin/svr_dlits.



    svr_dlits < table-of-peg-md5 > table-with-3-more-columns

Get the list of publications associated with each specified protein or gene.

This script takes as input a tab-delimited file with gene or protein IDs at the end of each line. For each ID, the associated literature references are found and the pubmed ID, title, and URL are appened to the input line.

This is a pipe command: the input is taken from the standard input and the output is to the standard output.

If a single ID is associated with multiple publications, there will be one output line for each publication.

Command-Line Options


The URL for the Sapling server, if it is to be different from the default.


Column index. If specified, indicates that the input IDs should be taken from the indicated column instead of the last column. The first column is column 1.