svr_call_pegs Script

Introduction

    svr_call_pegs [options] 

Call Genes using Annotation server.

This script takes a FASTA file of contigs from the standard input and writes the result of calling genes using Glimmer to the standard output.

Command-Line Options

--geneticCode

A number, generally either 11 or 4, representing the genetic code of the given contigs.

help

Display this command's parameters and options.

Output Format

The standard output is FASTA file of proteins.