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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|649764.3.peg.1527: Slackia exigua ATCC 700122

This feature in The SEED Viewer

NCBI Taxonomy Id: 649764

Current Assignment: Cysteine synthase (EC 2.5.1.47)
Translate Function Assignments


Context on contig NZ_GG700631 from base 353882 to 367012 (13131 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
1521 355324 353882 1443 -           hypothetical protein  
1522 356077 355544 534 - 219     4: 21 13 10 19   Adenine phosphoribosyltransferase (EC 2.4.2.7)  
1523 356460 356332 129 - 254         hypothetical protein  
1524 356618 357916 1299 + 157     3: 12 6 3   O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)  
1525 359087 357999 1089 - 82     1: 16   tRNA-specific 2-thiouridylase MnmA  
1526 359215 359084 132 - -4         hypothetical protein  
1527 360245 359316 930 - 100     11: 5 7 11 3 8 18 22 14 17 20 9   Cysteine synthase (EC 2.5.1.47)  
1528 360453 360884 432 + 207     2: 15 4   Iron-sulfur cluster regulator IscR  
1529 361363 361025 339 - 140         hypothetical protein  
1530 361545 361724 180 + 181         hypothetical protein  
1531 363898 362609 1290 - 884         hypothetical protein  
1532 364752 364108 645 - 209     2: 1 2   Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)  
1533 367012 364790 2223 - 37     2: 1 2   Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)  

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

Subsystem Curator Role
Cysteine_Biosynthesis OlgaZ Cysteine synthase (EC 2.5.1.47)
Experimental_Sulfur_transfer_Archaea vcrecy Cysteine synthase (EC 2.5.1.47)
Cysteine_Biosynthesis,_MCB_432 gjo Cysteine synthase (EC 2.5.1.47)
CLO_Cysteine Lerma-Ortiz_Claudia_user Cysteine synthase (EC 2.5.1.47)
dcernst_RidA_Cysteine_phenotype Ernst_Dustin_user Cysteine synthase (EC 2.5.1.47)
dcernst_RidA_proteins Ernst_Dustin_user Cysteine synthase (EC 2.5.1.47)
Methionine_Biosynthesis rodionov Cysteine synthase (EC 2.5.1.47)
Cysteine_biosynthesis_HGM_New Kutt_Laura_user Cysteine synthase (EC 2.5.1.47)
Proline Cysteine synthase (EC 2.5.1.47)
Fermentation_of_amino_acids_HGM_2 Cysteine synthase (EC 2.5.1.47)
Cysteine_biosynthesis_PanGenomes Acharya_Geeta_user Cysteine synthase (EC 2.5.1.47)


  Protein Sequence

>fig|649764.3.peg.1527 Cysteine synthase (EC 2.5.1.47)
MTVYTSIDQLIGNTPLLELKGIEAKEGLKARVLGKLEYFNPAGSVKDRIAKAMLDDAEAR
GKIGPGATIIEPTSGNTGVGLASVAAARGYKVVITMPETMSVERRLLMKAYGAQLVLTDG
SKGMKGAIAKAQELADQMPNSFLAGQFVNPANPAVHKATTGPEIWADTDGTVDIFVAGVG
TGGTVTGTGAYLKEQNSAVKVVAVEPASSPVLSEGTSGSHKIQGIGAGFVPDVLDTSVYD
EVVKVENDDAFETGREIGRLEGVLVGISSGAAVWAAVELAKRPENEGKTIVALLPDTGER
YLSTPLFAE

MD5 = 368f161d55b1ef90dbefcb639d653b77


  DNA Sequence

>fig|649764.3.peg.1527 Cysteine synthase (EC 2.5.1.47)
atgaccgtctacacatccattgaccagctcataggcaatacgccgctcctcgagctcaag
ggcatcgaagcgaaggagggcctgaaggcccgcgtgctcggcaagctcgagtatttcaat
cctgccggttcggtcaaagaccgcatcgccaaagccatgctcgacgatgccgaggcgcgc
ggcaagatcggcccgggcgccacgatcatcgaacccacctccggcaataccggcgtcggc
ctcgcttccgtggccgccgcgcgcgggtacaaggtcgtcatcacgatgcccgagaccatg
agcgtcgagcgtcgcctgctcatgaaggcctacggggcgcagctcgtcctgaccgacggc
tcgaagggcatgaagggcgccatcgcgaaggcgcaggaactcgccgaccagatgccgaac
agctttttggccggccagttcgtcaaccctgcgaatccggcggtccataaggccacgacc
ggtcctgaaatctgggcggacaccgacggcacggtcgacatcttcgtcgcaggcgtcggc
accggcggcacggtgacgggcacgggcgcgtacctcaaggagcagaattccgccgtcaag
gtcgtcgccgtcgaaccggcaagctctccggtcctgtccgaaggcacgtccggctcccat
aagatccagggtatcggcgcgggcttcgtgcccgatgtgctggacacgtccgtctacgac
gaggtcgtcaaggtcgaaaacgacgacgccttcgaaaccgggcgcgagatcggccgcctg
gaaggcgtgctcgtgggcatatcctcgggcgctgcggtctgggccgccgtcgagcttgcg
aagcgtccggaaaacgagggcaagaccatcgtcgcgctccttcccgatacgggcgagcgg
tacctgtccacgccgctgttcgccgaatag


  DNA with Flanking Sequence

>fig|649764.3.peg.1527 Cysteine synthase (EC 2.5.1.47)
gattcgtcttcgtcgaggcagggaacctgggcaagcccgccctcggtcaggcgcaggatc
tcgcctacggtgtacaacgagggatcgcgcgtcaggcgatatccgccgcccttgccacgc
agtccgacgagcaggccgttcttcacgagcaccttgaggatgctttcgaggtatttttcc
gaaatttcctgacgccgggcgatctccttcagaggcgtgtacgaacaggacatgtgttcg
gccaggtcgaccatgacgcgcagggcgtagcggcctttcgttgaaatcatcatatgctct
gcctcttctctcaattccattacccataatatcaccaggttgtatgtatttacagggaag
cgcatcatgaaccccgtgccgtcgtcttgactttattgctcgaagtaggtttaatccctc
taaacctacttagtagatagggttatgcagtgacgcatcttcggcacgacccgtctgcgt
gtcctcgaaaggaagctgccatgaccgtctacacatccattgaccagctcataggcaata
cgccgctcctcgagctcaagggcatcgaagcgaaggagggcctgaaggcccgcgtgctcg
gcaagctcgagtatttcaatcctgccggttcggtcaaagaccgcatcgccaaagccatgc
tcgacgatgccgaggcgcgcggcaagatcggcccgggcgccacgatcatcgaacccacct
ccggcaataccggcgtcggcctcgcttccgtggccgccgcgcgcgggtacaaggtcgtca
tcacgatgcccgagaccatgagcgtcgagcgtcgcctgctcatgaaggcctacggggcgc
agctcgtcctgaccgacggctcgaagggcatgaagggcgccatcgcgaaggcgcaggaac
tcgccgaccagatgccgaacagctttttggccggccagttcgtcaaccctgcgaatccgg
cggtccataaggccacgaccggtcctgaaatctgggcggacaccgacggcacggtcgaca
tcttcgtcgcaggcgtcggcaccggcggcacggtgacgggcacgggcgcgtacctcaagg
agcagaattccgccgtcaaggtcgtcgccgtcgaaccggcaagctctccggtcctgtccg
aaggcacgtccggctcccataagatccagggtatcggcgcgggcttcgtgcccgatgtgc
tggacacgtccgtctacgacgaggtcgtcaaggtcgaaaacgacgacgccttcgaaaccg
ggcgcgagatcggccgcctggaaggcgtgctcgtgggcatatcctcgggcgctgcggtct
gggccgccgtcgagcttgcgaagcgtccggaaaacgagggcaagaccatcgtcgcgctcc
ttcccgatacgggcgagcggtacctgtccacgccgctgttcgccgaatagggaggtattc
gggtgttcggcggattatgacgggcgttccgcacgattcccgcatggtttgatgcgcgga
atgcgatgcggcagggaaaggaggcttcacatgatgatatgcgtggatcatgcggcttcg
atgccgccgcgtcctgaggtgcgcgtagccttcgcgtgcgccctcgaggcatcatggggc
aatccgagcagcctgcccggggaaggagcggttcgccgatgacgaagcgcgtcatggtgg
gcatgagcggcggcgtcgattcgagcgttaccgcatacgtgctcaaacagcagggatacg
aagtcatcggtgccacgatgcgcctgcatggcagcgacctgcccggccgcgacgcgcgct
cgtgcgcgagccgtacctgttgcagcctggacgacgtcgaggatgccaaaagcgtcgcgc
gccgtttgggcatagcccatcgcacgatcgatttcaccgatcgtttcgaagacgccgtca
tcaagccgtt


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

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  Functional Coupling

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  Attributes

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  Protein Families

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