Protein Page for fig|426430.8.peg.1742

SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov

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Protein fig|426430.8.peg.1742: Staphylococcus aureus subsp. aureus str. Newman

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NCBI Taxonomy Id: 426430

Current Assignment: Cysteine desulfurase (EC 2.8.1.7)

Translate Function Assignments

Context on contig NC_009641 from base 1782338 to 1793464 (11127 bp)


Fid	Start	End	Size (nt)		Gap	Fc-sc	SS	Function	Aliases
1737	1783540	1782338	1203	-			6: 9 6 12 15 18 2	Acetate kinase (EC 2.7.2.1)	gene_name\|ackA, locus\|NWMN_1605, protein_id\|YP_001332639.1, gi\|151221817, geneID\|5330942
1738	1784575	1783628	948	-	87		2: 5 2	Adenine-specific methyltransferase (EC 2.1.1.72)	locus\|NWMN_1606, protein_id\|YP_001332640.1, gi\|151221818, geneID\|5331711
1739	1785192	1784698	495	-	122		2: 21 2	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	gene_name\|tpx, locus\|NWMN_1607, protein_id\|YP_001332641.1, gi\|151221819, geneID\|5330943
1740	1786060	1785290	771	-	97			Putative membrane protein YfcA	locus\|NWMN_1608, protein_id\|YP_001332642.1, gi\|151221820, geneID\|5330944
1741	1787327	1786104	1224	-	43	25	2: 19 16	tRNA S(4)U 4-thiouridine synthase (former ThiI)	gene_name\|thiI, locus\|NWMN_1609, protein_id\|YP_001332643.1, gi\|151221821, geneID\|5330945
1742	1788493	1787327	1167	-	-1		6: 13 11 10 1 20 3	Cysteine desulfurase (EC 2.8.1.7)	locus\|NWMN_1610, protein_id\|YP_001332644.1, gi\|151221822, geneID\|5332537
1743	1788630	1788764	135	+	136			FIG01108306: hypothetical protein
1744	1790532	1788838	1695	-	73	6	2: 8 1	Septation ring formation regulator EzrA	gene_name\|ezrA, locus\|NWMN_1611, protein_id\|YP_001332645.1, gi\|151221823, geneID\|5330946
1745	1790669	1791133	465	+	136		1: 1	Free methionine-(R)-sulfoxide reductase, contains GAF domain	locus\|NWMN_1612, protein_id\|YP_001332646.1, gi\|151221824, geneID\|5331891
1746	1791377	1791979	603	+	243	4	3: 17 4 1	SSU ribosomal protein S4p (S9e) @ SSU ribosomal protein S4p (S9e), zinc-independent	gene_name\|rpsD, locus\|NWMN_1613, protein_id\|YP_001332647.1, gi\|151221825, geneID\|5330947
1747	1792938	1792195	744	-	215			Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	locus\|NWMN_1614, protein_id\|YP_001332648.1, gi\|151221826, geneID\|5332407
1748	1793018	1793464	447	+	79		2: 14 7	Organic hydroperoxide resistance protein	locus\|NWMN_1615, protein_id\|YP_001332649.1, gi\|151221827, geneID\|5330948

Annotation History / View All Related Annotations

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Subsystems in Which This Protein Plays a Role


Subsystem	Curator	Role
CBSS-393130.3.peg.794	OlgaV	Cysteine desulfurase (EC 2.8.1.7)
CBSS-84588.1.peg.1247	OlgaV	Cysteine desulfurase (EC 2.8.1.7)
Experimental_Sulfur_transfer_Archaea	vcrecy	Cysteine desulfurase (EC 2.8.1.7)
Alanine_biosynthesis	OlgaZ	Cysteine desulfurase (EC 2.8.1.7)
Alr_Ahuja		Cysteine desulfurase (EC 2.8.1.7)
DNA/RNA_S_modification		Cysteine desulfurase (EC 2.8.1.7)

Protein Sequence

>fig|426430.8.peg.1742 Cysteine desulfurase (EC 2.8.1.7)
MINEREVFILIYLDNAATTKAFEEVLDTYLKVNQSMYYNPNSPHKAGLQANQLLQQAKTQ
INAMINSKTNYDVVFTSGATESNNLALKGIAYRKFDTAKEIITSVLEHPSVLEVVRYLEA
HEGFKVKYVDVKKDGSINLEHFKELMSDKVGLVTCMYVNNVTGQIQPIPQMAKVIKNYPK
AHFHVDAVQAFGKISMDLNNIDSISLSGHKFNGLKGQGVLLVNHIQNVEPTVHGGGQEYG
VRSGTVNLPNDIAMVKAMKIANENFEALNAFVTELNNDVRQFLNKYHGVYINSSTSGSPF
VLNISFPGVKGEVLVNAFSKYDIMISTTSACSSKRNKLNEVLAAMGLSDKSIEGSIRLSF
GATTTKEDIARFKEIFIIIYEEIKELLK

MD5 = f4ca70cddd96a9c0d2cca761b2704e6a

DNA Sequence

>fig|426430.8.peg.1742 Cysteine desulfurase (EC 2.8.1.7)
atgattaatgaaagagaagtgtttattttgatatatctagataatgcggcaacgacgaaa
gcatttgaagaagtgttagatacttatttaaaagtaaatcaatcaatgtattataatccg
aatagtccgcataaagctggtttgcaggcaaatcaattactacaacaagcaaaaacccaa
attaatgcaatgattaattcaaaaacaaattatgatgttgtattcactagtggtgcaact
gaatccaataatcttgctttaaaaggtattgcctatcgtaaatttgatacagcgaaggaa
ataattacatccgtgttagagcatccgtccgtattagaggttgtaagatatttggaagca
cacgaaggatttaaagttaaatatgttgatgtaaagaaagatggcagtattaacttagaa
cacttcaaagaattaatgtcagacaaagtcggtttagtaacatgtatgtatgtaaataat
gtaactggacaaatacagcctattccacaaatggctaaagttataaaaaattatcctaag
gcacattttcatgtagatgcggttcaagcattcggcaaaatttcaatggatctcaataac
atagatagtattagtttaagtggacacaagtttaatggtttaaaaggacaaggcgtctta
cttgtaaatcacattcaaaatgttgaaccaactgtccatggtggtggtcaagaatatggc
gttagaagtggaacagttaatttgccaaatgatattgcaatggttaaagcgatgaagata
gctaatgaaaactttgaagcattgaatgcatttgttactgagttaaataatgacgtccgt
caatttttaaataaatatcatggagtttatattaattcttcaacttcaggttcaccattc
gttttaaatattagttttcctggcgtaaaaggtgaagtattagttaatgctttttcaaaa
tatgacattatgatatctacgacaagtgcttgttcatctaaacgtaataaattaaatgaa
gtattggctgcaatgggattatcagacaaatctattgaaggtagtataagattatcattt
ggggctactacaactaaagaagatatagcgaggtttaaagaaatatttatcatcatttat
gaggaaattaaggagttgctaaaataa

DNA with Flanking Sequence

>fig|426430.8.peg.1742 Cysteine desulfurase (EC 2.8.1.7)
aaggactatagcaatgttgataagagcttaaatgaagctgaacgattatttaaaaataat
cgctataagcgtgcgattgaaattgcagagcaagctcttgaaagtgttgagccaggtgtt
actaaacatattgaagaagaagttattaagcaatagaaactagtatgtagttatacttaa
ataatatgagcactctgtcaaattggactgatgagtttaataattgaagttagccaacga
tacgttgtctagcttcttttttatatggataaatgaaagggacaataaatataaatagca
attgtttaaagataaacgtaatcaaatgtgttgttttaattaatataagtagtgaaaaaa
gcataatcacacagctgtttaaatagagtgaaatagtctaattcttatttaataagtaga
aataagattattttgcgctataacctttattttttgtcggataatagtataatgcttgag
taaaacaattttaacgattgatgattaatgaaagagaagtgtttattttgatatatctag
ataatgcggcaacgacgaaagcatttgaagaagtgttagatacttatttaaaagtaaatc
aatcaatgtattataatccgaatagtccgcataaagctggtttgcaggcaaatcaattac
tacaacaagcaaaaacccaaattaatgcaatgattaattcaaaaacaaattatgatgttg
tattcactagtggtgcaactgaatccaataatcttgctttaaaaggtattgcctatcgta
aatttgatacagcgaaggaaataattacatccgtgttagagcatccgtccgtattagagg
ttgtaagatatttggaagcacacgaaggatttaaagttaaatatgttgatgtaaagaaag
atggcagtattaacttagaacacttcaaagaattaatgtcagacaaagtcggtttagtaa
catgtatgtatgtaaataatgtaactggacaaatacagcctattccacaaatggctaaag
ttataaaaaattatcctaaggcacattttcatgtagatgcggttcaagcattcggcaaaa
tttcaatggatctcaataacatagatagtattagtttaagtggacacaagtttaatggtt
taaaaggacaaggcgtcttacttgtaaatcacattcaaaatgttgaaccaactgtccatg
gtggtggtcaagaatatggcgttagaagtggaacagttaatttgccaaatgatattgcaa
tggttaaagcgatgaagatagctaatgaaaactttgaagcattgaatgcatttgttactg
agttaaataatgacgtccgtcaatttttaaataaatatcatggagtttatattaattctt
caacttcaggttcaccattcgttttaaatattagttttcctggcgtaaaaggtgaagtat
tagttaatgctttttcaaaatatgacattatgatatctacgacaagtgcttgttcatcta
aacgtaataaattaaatgaagtattggctgcaatgggattatcagacaaatctattgaag
gtagtataagattatcatttggggctactacaactaaagaagatatagcgaggtttaaag
aaatatttatcatcatttatgaggaaattaaggagttgctaaaataatgaagtatgatca
cttgcttgttagatacggggagttaacattaaagggttcaaatagaaagaaatttgtaaa
tcaattaagaaataatgtaaataagtcattaaaaggacttgatgggtttgtcgttaaagg
caaacgagatcgtatgtatattgaacttgaagaccatgcagatataaatgaaataacata
tcgattatcaaaaattttcggtattaaatctattagtccagtattaaaagtagaaaaaac
aatagaggcaataagtgcagcggcaattaaatttgcgcagcaatttgaagaaaacagcac
atttaaaattgatgtgaagcgtgccgataaaaatttcccaatggatacgtatgaattaca
gcgtgaattgggtggtgcagtattgaagcacttcgacaatatttcagtgaatgtcaaacg
tccagatcatgaaattcgagtggaagttagattagatgcaatttatatgtatgaagaagt
tgttccg

Assignments for Essentially Identical Proteins


Id	Organism	Who	Assignment
cmr\|NT05SA1626	Staphylococcus aureus NCTC 8325		aminotransferase, class V
fig\|426430.6.peg.1561	Staphylococcus aureus subsp. aureus str. Newman	FIG	Cysteine desulfurase (EC 2.8.1.7)
fig\|451515.3.peg.1813	Staphylococcus aureus subsp. aureus USA300_FPR3757	FIG	Cysteine desulfurase (EC 2.8.1.7)
fig\|451516.9.peg.1802	Staphylococcus aureus subsp. aureus USA300_TCH1516	FIG	Cysteine desulfurase (EC 2.8.1.7)
fig\|455227.3.peg.1058	Staphylococcus aureus D30	FIG	Cysteine desulfurase (EC 2.8.1.7)
fig\|546342.3.peg.934	Staphylococcus aureus subsp. aureus str. JKD6008	FIG	Cysteine desulfurase (EC 2.8.1.7)
fig\|553567.3.peg.380	Staphylococcus aureus A5948	FIG	Cysteine desulfurase (EC 2.8.1.7)
fig\|553590.4.peg.1937	Staphylococcus aureus A9754	FIG	Cysteine desulfurase (EC 2.8.1.7)
fig\|553594.3.peg.1812	Staphylococcus aureus A9765	FIG	Cysteine desulfurase (EC 2.8.1.7)
fig\|644279.4.peg.1861	Staphylococcus aureus subsp. aureus 132	FIG	Cysteine desulfurase (EC 2.8.1.7)
fig\|93061.5.peg.1664	Staphylococcus aureus subsp. aureus NCTC 8325	FIG	Cysteine desulfurase (EC 2.8.1.7)
fig\|93062.19.peg.1723	Staphylococcus aureus subsp. aureus COL	FIG	Cysteine desulfurase (EC 2.8.1.7)
gb\|EEV84233.1	Staphylococcus aureus A5948		aminotransferase class V
gi\|257861425	Staphylococcus aureus A5948	NCBI	aminotransferase class V
gi\|258450889	Staphylococcus aureus A5948	NCBI	aminotransferase class V
ref\|ZP_05698942.1	Staphylococcus aureus A5948	RefSeq	aminotransferase class V

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Functional Coupling


Score	Peg	Function
25	fig\|426430.8.peg.1741	tRNA S(4)U 4-thiouridine synthase (former ThiI)
6	fig\|426430.8.peg.1744	Septation ring formation regulator EzrA
4	fig\|426430.8.peg.1746	SSU ribosomal protein S4p (S9e) @ SSU ribosomal protein S4p (S9e), zinc-independent

Attributes

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