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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
 The SEED

Subsystem: CBSS-393130.3.peg.794

Author: OlgaV


Functional Roles
Column Abbrev Functional Role GO Pre-Computed Publication(s) Relevant Publication(s)
1 R1 Septation ring formation regulator EzrA Add Publication(s)
2 R2 CDS_ID OB2202 Add Publication(s)
3 R4 SSU ribosomal protein S4p (S9e) Add Publication(s)
4 R6 Thiamine biosynthesis protein ThiI Add Publication(s)
5 CDS Cysteine desulfurase (EC 2.8.1.7) 5 Publication(s)
6 CDS_SufS Cysteine desulfurase (EC 2.8.1.7), SufS subfamily Add Publication(s)
Subsets of Roles
Subset Includes These Roles
AUX 6
CDS 5,6

Show Phylogenetic Tree
Basic Spreadsheet
Genome ID Organism Variant Code R1 R2 R4 R6 CDS CDS_SufS
644279.4 Staphylococcus aureus subsp. aureus 132 [B] 1 1863 1864 1865  
1774, 1861
 919
585143.3 Staphylococcus aureus subsp. aureus 55/2053 [B] 1 2248 2249 2250  
2158, 2247
 1367
585144.3 Staphylococcus aureus subsp. aureus 58-424 [B] 1 2279 2280 2281  
2183, 2278
 1727
585145.3 Staphylococcus aureus subsp. aureus 65-1322 [B] 1 1979 1980 1981  
1885, 1978
 1355
585146.3 Staphylococcus aureus subsp. aureus 68-397 [B] 1 2245 2246 2247  
2156, 2244
 1359
585147.3 Staphylococcus aureus subsp. aureus A017934/97 [B] 1 1319 1320 1321  
1231, 1318
 418
762962.3 Staphylococcus aureus subsp. aureus ATCC 51811 [B] 1 271 270 269  
273, 362
 1157
585148.3 Staphylococcus aureus subsp. aureus Btn1260 [B] 1 1295 1296 1297  
1207, 1294
 387
585149.6 Staphylococcus aureus subsp. aureus C101 [B] 1 1884 1885 1886  
1796, 1883
 981
585150.3 Staphylococcus aureus subsp. aureus C160 [B] 1 1971 1972 1973  
1882, 1970
 1412
Genome ID Organism Variant Code R1 R2 R4 R6 CDS CDS_SufS
585151.3 Staphylococcus aureus subsp. aureus C427 [B] 1 929 930 931  
841, 928
 449
93062.19 Staphylococcus aureus subsp. aureus COL [B] 1 1724 1725 1726  
1634, 1723
 893
93062.4 Staphylococcus aureus subsp. aureus COL [B] 1 434 435 436  
1510, 432
 1070
585152.3 Staphylococcus aureus subsp. aureus D139 [B] 1 1709 1710 1711  
1617, 1707
 757
585153.3 Staphylococcus aureus subsp. aureus E1410 [B] 1 1989 1990 1991  
1900, 1988
 1414
681288.4 Staphylococcus aureus subsp. aureus ED98 [B] 1 1730 1731 1732  
1620, 1728
 815
585154.3 Staphylococcus aureus subsp. aureus EMRSA16 [B] 1 1740 1741 1742  
1322, 1739
 825
585155.3 Staphylococcus aureus subsp. aureus H19 [B] 1 1950 1951 1952  
1844, 1948
 2184
359787.11 Staphylococcus aureus subsp. aureus JH1 [B] 1 1851 1852 1853  
1756, 1850
 902
Genome ID Organism Variant Code R1 R2 R4 R6 CDS CDS_SufS
359787.3 Staphylococcus aureus subsp. aureus JH1 [B] 2 315   202  
316, 1447
 2525
359786.13 Staphylococcus aureus subsp. aureus JH9 [B] 1 1875 1876 1877  
1779, 1873
 914
359786.3 Staphylococcus aureus subsp. aureus JH9 [B] 1 1727 1728 1729  
271, 1726
 2142
585156.3 Staphylococcus aureus subsp. aureus M1015 [B] 1 1264 1265 1266  
1176, 1263
 379
585157.3 Staphylococcus aureus subsp. aureus M809 [B] 1 1442 1443 1444  
1353, 1441
 540
585158.3 Staphylococcus aureus subsp. aureus M876 [B] 1 2229 2230 2231  
2141, 2228
 1349
585159.3 Staphylococcus aureus subsp. aureus M899 [B] 1 1784 1785 1786  
1696, 1783
 963
548470.3 Staphylococcus aureus subsp. aureus MN8 [B] 1 2512 2513 2514  
2423, 2511
 1659
282458.4 Staphylococcus aureus subsp. aureus MRSA252 [B] 1 1799 1800 1801  
1704, 1798
 877
Genome ID Organism Variant Code R1 R2 R4 R6 CDS CDS_SufS
282458.1 Staphylococcus aureus subsp. aureus MRSA252 [B] 1 1699 1700 1701  
1609, 1698
 819
282459.5 Staphylococcus aureus subsp. aureus MSSA476 [B] 1 1708 1709 1710  
1619, 1706
 819
282459.1 Staphylococcus aureus subsp. aureus MSSA476 [B] 1 1630 1631 1632  
1629, 1543
 779
196620.5 Staphylococcus aureus subsp. aureus MW2 [B] 1 1729 1730 1731  
1639, 1727
 840
196620.1 Staphylococcus aureus subsp. aureus MW2 [B] 1 1660 1661 1662  
1659, 1572
 797
418127.6 Staphylococcus aureus subsp. aureus Mu3 [B] 1 1749 1750 1751  
1653, 1748
 860
418127.4 Staphylococcus aureus subsp. aureus Mu3 [B] 1 1584 1585 1586  
1496, 1583
 787
158878.14 Staphylococcus aureus subsp. aureus Mu50 [B] 1 1772 1773 1774  
1675, 1770
 869
585891.3 Staphylococcus aureus subsp. aureus Mu50-omega [B] 1 1769 1770 1771  
1672, 1767
 868
Genome ID Organism Variant Code R1 R2 R4 R6 CDS CDS_SufS
158878.1 Staphylococcus aureus subsp. aureus Mu50 [B] 1 1717 1718 1719  
1716, 1622
 844
158879.11 Staphylococcus aureus subsp. aureus N315 [B] 1 1660 1661 1662  
1564, 1658
 830
158879.1 Staphylococcus aureus subsp. aureus N315 [B] 1 1589 1590 1591  
1497, 1588
 798
93061.5 Staphylococcus aureus subsp. aureus NCTC 8325 [B] 1 1666 1667 1668  
1575, 1664
 772
93061.3 Staphylococcus aureus subsp. aureus NCTC 8325 [B] 1 1661 1662 1663  
1659, 1741
 814
548474.3 Staphylococcus aureus subsp. aureus TCH130 [B] 1 2177 2176 2175  
688, 2179
 1402
548473.3 Staphylococcus aureus subsp. aureus TCH60 [B] 1 1564 1563 1562  
1565, 1652
 1076
548475.3 Staphylococcus aureus subsp. aureus TCH70 [B] 1 702 703 704  
611, 700
 1142
367830.3 Staphylococcus aureus subsp. aureus USA300 [B] 1 1005 1006 1007  
1004, 393
 106
Genome ID Organism Variant Code R1 R2 R4 R6 CDS CDS_SufS
451515.3 Staphylococcus aureus subsp. aureus USA300_FPR3757 [B] 1 1815 1816 1817  
1724, 1813
 908
451516.9 Staphylococcus aureus subsp. aureus USA300_TCH1516 [B] 1 1804 1805 1806  
1713, 1802
 914
450394.6 Staphylococcus aureus subsp. aureus USA300_TCH959 [B] 1 969 970 971  
880, 968
 42
585160.3 Staphylococcus aureus subsp. aureus WBG10049 [B] 1 1251 1252 1253  
1162, 1250
 374
585161.3 Staphylococcus aureus subsp. aureus WW2703/97 [B] 1 1433 1434 1435  
1344, 1432
 584
505321.3 Staphylococcus aureus subsp. aureus str. CF-Marseille [B] 1 566 565 564  
437, 2144, 568
 2426
546342.3 Staphylococcus aureus subsp. aureus str. JKD6008 [B] 1 936 937 938  
934, 2067
 188
546343.3 Staphylococcus aureus subsp. aureus str. JKD6009 [B] 1 2414 2415 2416  
1132, 2412
 1962
426430.8 Staphylococcus aureus subsp. aureus str. Newman [B] 1 1744 1745 1746  
1653, 1742
 855
Genome ID Organism Variant Code R1 R2 R4 R6 CDS CDS_SufS
426430.6 Staphylococcus aureus subsp. aureus str. Newman [B] 1 1562 1563 1564  
1561, 1478
 769

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