The SEED: an Annotation/Analysis Tool Provided by FIG
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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
 The SEED

Subsystem: Alpha-Amylase_locus_in_Streptocococcus

Author: RamyA


Functional Roles
Column Abbrev Functional Role GO Pre-Computed Publication(s) Relevant Publication(s)
1 AmyA Cyclomaltodextrin glucanotransferase (EC 2.4.1.19) Add Publication(s)
2 MalE Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Add Publication(s)
3 Tra Transposase (maltose area) Add Publication(s)
4 Est putative esterase Add Publication(s)

Show Phylogenetic Tree
Basic Spreadsheet
Genome ID Organism Variant Code AmyA MalE Tra Est
644279.4 Staphylococcus aureus subsp. aureus 132 [B] 3   280   2493
585143.3 Staphylococcus aureus subsp. aureus 55/2053 [B] 3   467   826
585144.3 Staphylococcus aureus subsp. aureus 58-424 [B] 3   364   815, 816
585145.3 Staphylococcus aureus subsp. aureus 65-1322 [B] 3   180   624
585146.3 Staphylococcus aureus subsp. aureus 68-397 [B] 3   791   195
585147.3 Staphylococcus aureus subsp. aureus A017934/97 [B] 3   2532   1908
762962.3 Staphylococcus aureus subsp. aureus ATCC 51811 [B] 3   1611   2160
585148.3 Staphylococcus aureus subsp. aureus Btn1260 [B] 3   2668   2134
585149.6 Staphylococcus aureus subsp. aureus C101 [B] 3   354   2526
585150.3 Staphylococcus aureus subsp. aureus C160 [B] 3   294   743
Genome ID Organism Variant Code AmyA MalE Tra Est
585151.3 Staphylococcus aureus subsp. aureus C427 [B] 3   2059   2336
93062.19 Staphylococcus aureus subsp. aureus COL [B] 3   192   2291
93062.4 Staphylococcus aureus subsp. aureus COL [B] 3   659   2405
585152.3 Staphylococcus aureus subsp. aureus D139 [B] 3   123   2331
585153.3 Staphylococcus aureus subsp. aureus E1410 [B] 3   133   624
681288.4 Staphylococcus aureus subsp. aureus ED98 [B] 3   186   2378
585154.3 Staphylococcus aureus subsp. aureus EMRSA16 [B] 3   159   2415
585155.3 Staphylococcus aureus subsp. aureus H19 [B] 3   443   896
359787.11 Staphylococcus aureus subsp. aureus JH1 [B] 3   240   2477
Genome ID Organism Variant Code AmyA MalE Tra Est
359787.3 Staphylococcus aureus subsp. aureus JH1 [B] 3   1893   1865
359786.13 Staphylococcus aureus subsp. aureus JH9 [B] 3   243   2514
359786.3 Staphylococcus aureus subsp. aureus JH9 [B] 3   1082   1383
585156.3 Staphylococcus aureus subsp. aureus M1015 [B] 3   2559   1906
585157.3 Staphylococcus aureus subsp. aureus M809 [B] 3   2615   2023
585158.3 Staphylococcus aureus subsp. aureus M876 [B] 3   936   403
585159.3 Staphylococcus aureus subsp. aureus M899 [B] 3   347   2459
548470.3 Staphylococcus aureus subsp. aureus MN8 [B] 3   1226   992
282458.4 Staphylococcus aureus subsp. aureus MRSA252 [B] 3   208   2457
Genome ID Organism Variant Code AmyA MalE Tra Est
282458.1 Staphylococcus aureus subsp. aureus MRSA252 [B] 3   194   2306
282459.5 Staphylococcus aureus subsp. aureus MSSA476 [B] 3   201   2331
282459.1 Staphylococcus aureus subsp. aureus MSSA476 [B] 3   179   2220
196620.5 Staphylococcus aureus subsp. aureus MW2 [B] 3   206   2348
196620.1 Staphylococcus aureus subsp. aureus MW2 [B] 3   190   2271
418127.6 Staphylococcus aureus subsp. aureus Mu3 [B] 3   215   2398
418127.4 Staphylococcus aureus subsp. aureus Mu3 [B] 3   192   2155
158878.14 Staphylococcus aureus subsp. aureus Mu50 [B] 3   216   2433
585891.3 Staphylococcus aureus subsp. aureus Mu50-omega [B] 3   216   2429
Genome ID Organism Variant Code AmyA MalE Tra Est
158878.1 Staphylococcus aureus subsp. aureus Mu50 [B] 3   214   2350
158879.11 Staphylococcus aureus subsp. aureus N315 [B] 3   218   2324
158879.1 Staphylococcus aureus subsp. aureus N315 [B] 3   212   2225
93061.5 Staphylococcus aureus subsp. aureus NCTC 8325 [B] 3   164   2376
93061.3 Staphylococcus aureus subsp. aureus NCTC 8325 [B] 3   187   2480
548474.3 Staphylococcus aureus subsp. aureus TCH130 [B] 3   2282   526
548473.3 Staphylococcus aureus subsp. aureus TCH60 [B] 3   618   240
548475.3 Staphylococcus aureus subsp. aureus TCH70 [B] 3   2202   1819
367830.3 Staphylococcus aureus subsp. aureus USA300 [B] 3   1818   2584
Genome ID Organism Variant Code AmyA MalE Tra Est
451515.3 Staphylococcus aureus subsp. aureus USA300_FPR3757 [B] 3   269   2452
451516.9 Staphylococcus aureus subsp. aureus USA300_TCH1516 [B] 3   259   2441
450394.6 Staphylococcus aureus subsp. aureus USA300_TCH959 [B] 3   1965   1851
585160.3 Staphylococcus aureus subsp. aureus WBG10049 [B] 3   1734   2166
585161.3 Staphylococcus aureus subsp. aureus WW2703/97 [B] 3   228   2221
505321.3 Staphylococcus aureus subsp. aureus str. CF-Marseille [B] 3   914   136
546342.3 Staphylococcus aureus subsp. aureus str. JKD6008 [B] 3   1899   1032
546343.3 Staphylococcus aureus subsp. aureus str. JKD6009 [B] 3   765   1313
426430.8 Staphylococcus aureus subsp. aureus str. Newman [B] 3   162   2449
Genome ID Organism Variant Code AmyA MalE Tra Est
426430.6 Staphylococcus aureus subsp. aureus str. Newman [B] 3   151   2180

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