Annotation Overview for fig|526218.6.peg.1346 in Sebaldella termitidis ATCC 33386:
Prophage ps3 protein 01, N-terminal DNA-binding domain / Prophage ps3 protein 01, C-terminal domain

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current assignment	This feature plays multiple roles which are implemented by distinct domains within the feature. The roles are: Prophage ps3 protein 01, N-terminal DNA-binding domain Prophage ps3 protein 01, C-terminal domain Prophage ps3 protein 01, N-terminal DNA-binding domain / Prophage ps3 protein 01, C-terminal domain
taxonomy id	526218	contig	NC_013517 (4,418,842bp)NC_013518 (54,160bp)NC_013519 (13,648bp)
internal links	genome browser | feature evidence | sequence	ACH Annotation Clearinghouse (ACH) The Annotation Clearinghouse offers a mapping of genes which are identical in sequence except for the start region (due to differences in start calling). [?]	show essentially identical genes
annotation history		run tool	Psi-BlastTMpredTMHMMGram negative PSORTGram negative SignalPGram positive PSORTGram positive SignalPLipoPRadarPPSearchGram negative CELLOGram positive CELLOProDomPDBRNAFold
CDD link	show cdd
alignments and trees	1 alignments and trees	PATRIC link	32406582
edit functional role	Prophage ps3 protein 01, N-terminal DNA-binding domain Prophage ps3 protein 01, C-terminal domain
aliases	InterPro:IPR001387 geneID|8596793 gi|269119936 locus|Sterm_1316 protein_id|YP_003308113.1	propagation lock	Unlocked Toggle lock

Annotation History (history of similar genes)

Date	Annotator	Annotation
3/15/2010	rapid_propogation	Set function to hypothetical protein from original annotations
3/15/2010	rapid_propogation	Set function to hypothetical protein based on unreliable automated assignments
1/20/2012	md5_consistency	Set master function to Helix-turn-helix motif
1/20/2012	md5_consistency	assignment made to reconcile multiple functions for the same md5
8/7/2023	annotation_transfer	Migrating 2 annotations for fig|526218.6.peg.1346 from core seed (including function assignment) at 2023-08-08 01:15:05
8/7/2023	Olsen_Gary_user	Migrate assignment from Helix-turn-helix motif to Prophage ps3 protein 01, N-terminal DNA-binding domain / Prophage ps3 protein 01, C-terminal domain
8/7/2023	Olsen_Gary_user	Assignment projected from fig|403833.5.peg.1272 based on similarity
8/8/2023	Olsen_Gary_user	Set master function to Prophage ps3 protein 01, N-terminal DNA-binding domain / Prophage ps3 protein 01, C-terminal domain

The chromosomal region of the focus gene (top) is compared with four similar organisms. The graphic is centered on the focus gene, which is red and numbered 1. Sets of genes with similar sequence are grouped with the same number and color. Genes whose relative position is conserved in at least four other species are functionally coupled and share gray background boxes. The size of the region and the number of genomes may be reset. Click on any arrow in the display to refocus the comparison on that gene. The focus gene always points to the right, even if it is located on the minus strand.