Welcome to the SEED Viewer - a read-only browser of the curated SEED data.
For more information about The SEED please visit theSEED.org. For daily updates on SEED activity visit the Daily SEED
The Annotation Clearinghouse offers a mapping of genes which are identical in sequence except for the start region (due to differences in start calling).
Set function to
bacteriophage tail assembly protein
from original annotations
1/20/2010
rapid_propogation
Set function to
Phage terminase, large subunit
based on FIGfams
1/20/2012
RossO
Assigned based on tree proximity to fig|314262.3.peg.596
9/24/2018
VeronikaV
Set master function to
Phage head, terminase DNA packaging protein A
9/24/2018
VeronikaV
Assignment projected from fig|469381.4.peg.512 based on identical sequence
9/28/2018
VeronikaV
Set master function to
Phage terminase, large subunit
9/28/2018
VeronikaV
Assignment projected from fig|469381.4.peg.512 based on identical sequence
This feature is part of a subsystem
In Phage head and packaging its role is Phage terminase, large subunit.
Compare Regions For fig|469381.5.peg.11
The chromosomal region of the focus gene (top) is compared with four similar organisms. The graphic is centered on the focus gene, which is red and numbered 1. Sets of genes with similar sequence are grouped with the same number and color. Genes whose relative position is conserved in at least four other species are functionally coupled and share gray background boxes. The size of the region and the number of genomes may be reset. Click on any arrow in the display to refocus the comparison on that gene. The focus gene always points to the right, even if it is located on the minus strand.
