Welcome to the SEED Viewer - a read-only browser of the curated SEED data.
For more information about The SEED please visit theSEED.org. For daily updates on SEED activity visit the Daily SEED
The Annotation Clearinghouse offers a mapping of genes which are identical in sequence except for the start region (due to differences in start calling).
Set function to
conserved hypothetical protein
from original annotations
1/22/2010
rapid_propogation
Set function to
hypothetical protein
based on unreliable automated assignments
12/7/2011
cleanup_2011_12_7
Set master function to
TrsK-like protein
12/7/2011
cleanup_2011_12_7
recalled functions using kmers
This feature is not yet part of a subsystem.
Compare Regions For fig|457421.5.peg.4014
The chromosomal region of the focus gene (top) is compared with four similar organisms. The graphic is centered on the focus gene, which is red and numbered 1. Sets of genes with similar sequence are grouped with the same number and color. Genes whose relative position is conserved in at least four other species are functionally coupled and share gray background boxes. The size of the region and the number of genomes may be reset. Click on any arrow in the display to refocus the comparison on that gene. The focus gene always points to the right, even if it is located on the minus strand.
