Annotation Overview for fig|399741.3.peg.9 in Serratia proteamaculans 568:
Phage terminase, large subunit

[to old protein page]

current assignment	Phage terminase, large subunit
taxonomy id	399741	contig	NC_009829 (46,804bp)NC_009832 (5,448,853bp)
internal links	genome browser | feature evidence | sequence	ACH Annotation Clearinghouse (ACH) The Annotation Clearinghouse offers a mapping of genes which are identical in sequence except for the start region (due to differences in start calling). [?]	show essentially identical genes
annotation history		run tool	Psi-BlastTMpredTMHMMGram negative PSORTGram negative SignalPGram positive PSORTGram positive SignalPLipoPRadarPPSearchGram negative CELLOGram positive CELLOProDomPDBRNAFold
CDD link	show cdd
PATtyfam	PGF_00056233: Terminase large subunit PLF_613_00019287: Terminase large subunit
alignments and trees	1 alignments and trees
edit functional role	Phage terminase, large subunit
aliases	GeneID:5602451 InterPro:IPR008866 Spro_4922 YP_001471690.1 gi|157362831	propagation lock	Unlocked Toggle lock

Annotation History (history of similar genes)

Date	Annotator	Annotation
7/23/2008	rapid_propogation	Set function to Terminase large subunit based on unreliable automated assignments
1/20/2012	md5_consistency	Set master function to Phage terminase, large subunit
1/20/2012	md5_consistency	assignment made to reconcile multiple functions for the same md5
1/25/2018	annotation_transfer	Migrating 2 annotations for fig|399741.3.peg.9 from core seed (including function assignment) at 2018-01-26 01:15:11
1/25/2018	VeronikaV	Migrate assignment from Phage terminase, large subunit to Phage head, terminase DNA packaging protein A
1/25/2018	VeronikaV	Assignment projected from fig|83334.1.peg.1676 based on similarity
1/26/2018	VeronikaV	Set master function to Phage head, terminase DNA packaging protein A
9/27/2018	annotation_transfer	Migrating 2 annotations for fig|399741.3.peg.9 from core seed (including function assignment) at 2018-09-28 01:15:06
9/27/2018	VeronikaV	Migrate assignment from Phage head, terminase DNA packaging protein A to Phage terminase, large subunit
9/27/2018	VeronikaV	Role changed from 'Phage head, terminase DNA packaging protein A' to 'Phage terminase, large subunit'
9/28/2018	VeronikaV	Set master function to Phage terminase, large subunit

We have assigned the function "Phage terminase, large subunit" to the encoded protein.

The chromosomal region of the focus gene (top) is compared with four similar organisms. The graphic is centered on the focus gene, which is red and numbered 1. Sets of genes with similar sequence are grouped with the same number and color. Genes whose relative position is conserved in at least four other species are functionally coupled and share gray background boxes. The size of the region and the number of genomes may be reset. Click on any arrow in the display to refocus the comparison on that gene. The focus gene always points to the right, even if it is located on the minus strand.