Annotation Overview for fig|396513.4.peg.480 in Staphylococcus carnosus subsp. carnosus TM300:
Phage replication initiation protein

[to old protein page]

current assignment	Phage replication initiation protein
taxonomy id	396513	contig	NC_012121 (2,566,424bp)
internal links	genome browser | feature evidence | sequence	ACH Annotation Clearinghouse (ACH) The Annotation Clearinghouse offers a mapping of genes which are identical in sequence except for the start region (due to differences in start calling). [?]	show essentially identical genes
annotation history		run tool	Psi-BlastTMpredTMHMMGram negative PSORTGram negative SignalPGram positive PSORTGram positive SignalPLipoPRadarPPSearchGram negative CELLOGram positive CELLOProDomPDBRNAFold
CDD link	show cdd
PATtyfam	PGF_00399770: hypothetical protein within a prophage PLF_1279_00003204: hypothetical protein within a prophage
alignments and trees	2 alignments and trees	PATRIC link	19601726
edit functional role	Phage replication initiation protein
aliases	geneID|7550081 gi|224475971 locus|Sca_0478 protein_id|YP_002633577.1	propagation lock	Unlocked Toggle lock

Annotation History (history of similar genes)

Date	Annotator	Annotation
11/26/2009	rapid_propogation	Set function to hypothetical protein from original annotations
11/26/2009	rapid_propogation	Set function to hypothetical protein based on unreliable automated assignments
6/16/2010	fig	Set master function to Phage replication initiation
12/7/2011	cleanup_2011_12_7	Set master function to FIG01108033: hypothetical protein
12/7/2011	cleanup_2011_12_7	recalled functions using kmers
6/13/2018	annotation_transfer	Migrating 1 annotations for fig|396513.4.peg.480 from core seed (including function assignment) at 2018-06-14 01:15:04
6/13/2018	VeronikaV	Migrate assignment from FIG01108033: hypothetical protein to Phage replication initiation protein
6/14/2018	VeronikaV	Set master function to Phage replication initiation protein

The chromosomal region of the focus gene (top) is compared with four similar organisms. The graphic is centered on the focus gene, which is red and numbered 1. Sets of genes with similar sequence are grouped with the same number and color. Genes whose relative position is conserved in at least four other species are functionally coupled and share gray background boxes. The size of the region and the number of genomes may be reset. Click on any arrow in the display to refocus the comparison on that gene. The focus gene always points to the right, even if it is located on the minus strand.