Annotation Overview for fig|387910.2.peg.24 in Siphoviridae Staphylococcus aureus phage phiNM4:
Phage phi 11 orf19 protein homolog

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current assignment	Phage phi 11 orf19 protein homolog
taxonomy id	387910	contig	DQ530362 (43,189bp)
internal links	genome browser | feature evidence | sequence	ACH Annotation Clearinghouse (ACH) The Annotation Clearinghouse offers a mapping of genes which are identical in sequence except for the start region (due to differences in start calling). [?]	show essentially identical genes
annotation history		run tool	Psi-BlastTMpredTMHMMGram negative PSORTGram negative SignalPGram positive PSORTGram positive SignalPLipoPRadarPPSearchGram negative CELLOGram positive CELLOProDomPDBRNAFold
CDD link	show cdd
PATtyfam	PGF_00329289: hypothetical protein
alignments and trees	1 alignments and trees
edit functional role	Phage phi 11 orf19 protein homolog
aliases	gi|104641941 protein_id|ABF73249.1	propagation lock	Unlocked Toggle lock

Annotation History (history of similar genes)

Date	Annotator	Annotation
12/7/2011	cleanup_2011_12_7	Set master function to Hypothetical protein, PV83 orf23 homolog [SA bacteriophages 11, Mu50B]
12/7/2011	cleanup_2011_12_7	recalled functions using kmers
1/21/2012	md5_consistency	Set master function to Phage protein
1/21/2012	md5_consistency	assignment made to reconcile multiple functions for the same md5
5/3/2018	annotation_transfer	Migrating 4 annotations for fig|387910.2.peg.24 from core seed (no function assignment necessary) at 2018-05-04 01:15:04
5/3/2018	VeronikaV	batch assignment start for 'Hypothetical%20protein%2C%20PV83%20orf23%20homolog%20%5BSA%20bacteriophages%2011%2C%20Mu50B%5D' fig|320843.3.peg.18 options
5/3/2018	VeronikaV	Skipping assignment to Hypothetical protein, PV83 orf23 homolog [SA bacteriophages 11, Mu50B]
5/3/2018	VeronikaV	Assignment projected from fig|320843.3.peg.18 based on identical sequence
5/3/2018	VeronikaV	batch assignment end for 'Hypothetical%20protein%2C%20PV83%20orf23%20homolog%20%5BSA%20bacteriophages%2011%2C%20Mu50B%5D'
5/4/2018	VeronikaV	Set master function to Hypothetical protein, PV83 orf23 homolog [SA bacteriophages 11, Mu50B]
5/4/2018	VeronikaV	Assignment projected from fig|53369.2.peg.25 based on identical sequence
7/16/2018	annotation_transfer	Migrating 4 annotations for fig|387910.2.peg.24 from core seed (no function assignment necessary) at 2018-07-17 01:15:07
7/16/2018	VeronikaV	batch assignment start for 'Phage%20PV83%20orf%2023-like%20protein' fig|387908.2.peg.24 options return_value: all_lists annotation: Role%20changed%20from%20%27Hypothetical%20protein%2C%20PV83%20orf23%20homolog%20%5BSA%20bacteriophages%2011%2C%20Mu50B%5D%27%20to%20%27Phage%20PV83%20orf%2023-like%20protein%27
7/16/2018	VeronikaV	Skipping assignment to Phage PV83 orf 23-like protein
7/16/2018	VeronikaV	Assignment projected from fig|387908.2.peg.24 based on identical sequence
7/16/2018	VeronikaV	batch assignment end for 'Phage%20PV83%20orf%2023-like%20protein'
7/17/2018	VeronikaV	Set master function to Phage PV83 orf 23-like protein
7/17/2018	VeronikaV	Assignment projected from fig|53369.2.peg.25 based on identical sequence
7/29/2018	annotation_transfer	Migrating 4 annotations for fig|387910.2.peg.24 from core seed (no function assignment necessary) at 2018-07-30 01:15:04
7/29/2018	VeronikaV	batch assignment start for 'Phage%20phi%2011%20orf14%20protein%20homolog' fig|387910.2.peg.24 options return_value: all_lists annotation: Role%20changed%20from%20%27Phage%20PV83%20orf%2023-like%20protein%27%20to%20%27Phage%20phi%2011%20orf14%20protein%20homolog%27
7/29/2018	VeronikaV	Skipping assignment to Phage phi 11 orf14 protein homolog
7/29/2018	VeronikaV	Role changed from 'Phage PV83 orf 23-like protein' to 'Phage phi 11 orf14 protein homolog'
7/29/2018	VeronikaV	batch assignment end for 'Phage%20phi%2011%20orf14%20protein%20homolog'
7/30/2018	VeronikaV	Set master function to Phage phi 11 orf14 protein homolog
7/30/2018	VeronikaV	Assignment projected from fig|53369.2.peg.25 based on identical sequence
7/30/2018	annotation_transfer	Migrating 8 annotations for fig|387910.2.peg.24 from core seed (no function assignment necessary) at 2018-07-31 01:15:04
7/30/2018	VeronikaV	batch assignment start for 'Phage%20phi%2011%20orf19%20protein%20homolog' fig|53369.2.peg.25 options
7/30/2018	VeronikaV	Skipping assignment to Phage phi 11 orf19 protein homolog
7/30/2018	VeronikaV	Assignment projected from fig|53369.2.peg.25 based on identical sequence
7/30/2018	VeronikaV	batch assignment end for 'Phage%20phi%2011%20orf19%20protein%20homolog'
7/30/2018	VeronikaV	batch assignment start for 'Phage%20phi%2011%20orf19%20protein%20homolog' fig|387905.2.peg.22 options
7/30/2018	VeronikaV	batch assignment end for 'Phage%20phi%2011%20orf19%20protein%20homolog'
7/30/2018	VeronikaV	batch assignment start for 'Phage%20phi%2011%20orf19%20protein%20homolog' fig|387908.2.peg.24 options
7/30/2018	VeronikaV	batch assignment end for 'Phage%20phi%2011%20orf19%20protein%20homolog'
7/31/2018	VeronikaV	Set master function to Phage phi 11 orf19 protein homolog
7/31/2018	VeronikaV	Assignment projected from fig|53369.2.peg.25 based on identical sequence

The chromosomal region of the focus gene (top) is compared with four similar organisms. The graphic is centered on the focus gene, which is red and numbered 1. Sets of genes with similar sequence are grouped with the same number and color. Genes whose relative position is conserved in at least four other species are functionally coupled and share gray background boxes. The size of the region and the number of genomes may be reset. Click on any arrow in the display to refocus the comparison on that gene. The focus gene always points to the right, even if it is located on the minus strand.