Annotation Overview for fig|351745.7.peg.2309 in Shewanella sp. W3-18-1:
Phage tail length tape-measure protein 1

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current assignment	Phage tail length tape-measure protein 1
taxonomy id	351745	contig	NC_008750 (4,708,380bp)
internal links	genome browser | feature evidence | sequence	ACH Annotation Clearinghouse (ACH) The Annotation Clearinghouse offers a mapping of genes which are identical in sequence except for the start region (due to differences in start calling). [?]	show essentially identical genes
annotation history		run tool	Psi-BlastTMpredTMHMMGram negative PSORTGram negative SignalPGram positive PSORTGram positive SignalPLipoPRadarPPSearchGram negative CELLOGram positive CELLOProDomPDBRNAFold
CDD link	show cdd
PATtyfam	PGF_00032732: Phage tail length tape-measure protein 1 PLF_22_00009713: Phage tail length tape-measure protein 1
alignments and trees	1 alignments and trees
edit functional role	Phage tail length tape-measure protein 1
aliases	GeneID:4659657 InterPro:IPR006431 InterPro:IPR009628 Sputw3181_2470 YP_963848.1 gi|120599274	propagation lock	Unlocked Toggle lock

Annotation History (history of similar genes)

Date	Annotator	Annotation
6/6/2006	ncbi	Set master function to K+ transporter Trk
10/18/2007	rapid_propogation	Set function to phage tail tape measure protein, lambda family from original annotations
10/18/2007	rapid_propogation	Set function to probable tail length tape measure protein based on unreliable automated assignments
11/1/2007	salvage	Using RAST assignment due to no subsystem membership probable tail length tape measure protein
11/1/2007	salvage	Set master function to probable tail length tape measure protein
10/2/2008	RamyA	Set master function to Phage tail length tape-measure protein 1
2/11/2009	RamyA	Set master function to Phage tail length tape-measure protein 1

We have assigned the function "Phage tail length tape-measure protein 1" to the encoded protein. The protein occurs in 1 subsystem: "Phage tail proteins 2".

The chromosomal region of the focus gene (top) is compared with four similar organisms. The graphic is centered on the focus gene, which is red and numbered 1. Sets of genes with similar sequence are grouped with the same number and color. Genes whose relative position is conserved in at least four other species are functionally coupled and share gray background boxes. The size of the region and the number of genomes may be reset. Click on any arrow in the display to refocus the comparison on that gene. The focus gene always points to the right, even if it is located on the minus strand.