Annotation Overview for fig|351745.7.peg.2296 in Shewanella sp. W3-18-1:
Phage tail fiber protein

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current assignment	Phage tail fiber protein
comment	Phage host specificity protein J
taxonomy id	351745	contig	NC_008750 (4,708,380bp)
internal links	genome browser | feature evidence | sequence	ACH Annotation Clearinghouse (ACH) The Annotation Clearinghouse offers a mapping of genes which are identical in sequence except for the start region (due to differences in start calling). [?]	show essentially identical genes
annotation history		run tool	Psi-BlastTMpredTMHMMGram negative PSORTGram negative SignalPGram positive PSORTGram positive SignalPLipoPRadarPPSearchGram negative CELLOGram positive CELLOProDomPDBRNAFold
CDD link	show cdd
PATtyfam	PGF_00032707: Phage tail fiber protein PLF_22_00009712: Phage tail fiber protein
edit functional role	Phage tail fiber protein
aliases	GeneID:4659013 InterPro:IPR000276 InterPro:IPR003610 InterPro:IPR003961 Sputw3181_2456 YP_963834.1 gi|120599260	propagation lock	Unlocked Toggle lock

Annotation History (history of similar genes)

Date	Annotator	Annotation
6/6/2006	ncbi	Set master function to conserved hypothetical protein
10/18/2007	rapid_propogation	Set function to Carbohydrate-binding family V/XII from original annotations
10/18/2007	rapid_propogation	Set function to COG4733: Phage-related protein, tail component based on unreliable automated assignments
11/1/2007	salvage	Using RAST assignment due to no subsystem membership COG4733: Phage-related protein, tail component
11/1/2007	salvage	Set master function to COG4733: Phage-related protein, tail component
2/11/2009	RamyA	Set master function to Phage tail fiber protein #Phage host specificity protein J

We have assigned the function "Phage tail fiber protein" to the encoded protein. The protein occurs in 1 subsystem: "Phage tail fiber proteins".

The chromosomal region of the focus gene (top) is compared with four similar organisms. The graphic is centered on the focus gene, which is red and numbered 1. Sets of genes with similar sequence are grouped with the same number and color. Genes whose relative position is conserved in at least four other species are functionally coupled and share gray background boxes. The size of the region and the number of genomes may be reset. Click on any arrow in the display to refocus the comparison on that gene. The focus gene always points to the right, even if it is located on the minus strand.