Welcome to the SEED Viewer - a read-only browser of the curated SEED data.
For more information about The SEED please visit theSEED.org. For daily updates on SEED activity visit the Daily SEED
The Annotation Clearinghouse offers a mapping of genes which are identical in sequence except for the start region (due to differences in start calling).
Assignment projected from fig|320846.3.peg.55 based on identical sequence
5/4/2018
VeronikaV
Set master function to
Hypothetical protein, phi-ETA orf17 homolog [SA bacteriophages 11, Mu50B]
5/4/2018
VeronikaV
Assignment projected from fig|259901.1.peg.38 based on identical sequence
5/4/2018
annotation_transfer
Migrating 2 annotations for fig|320843.3.peg.6 from core seed (no function assignment necessary) at 2018-05-05 01:15:16
5/4/2018
VeronikaV
batch assignment start for 'Hypothetical%20protein%2C%20phi-ETA%20orf17%20homolog%20%5BSA%20bacteriophages%2011%2C%20Mu50B%5D'
fig|320834.3.peg.49
options
5/4/2018
VeronikaV
batch assignment end for 'Hypothetical%20protein%2C%20phi-ETA%20orf17%20homolog%20%5BSA%20bacteriophages%2011%2C%20Mu50B%5D'
7/30/2018
annotation_transfer
Migrating 2 annotations for fig|320843.3.peg.6 from core seed (no function assignment necessary) at 2018-07-31 01:15:04
7/30/2018
VeronikaV
Skipping assignment to Phage phi 11 orf12 protein homolog
7/30/2018
VeronikaV
Assignment projected from fig|387910.2.peg.15 based on identical sequence
7/31/2018
VeronikaV
Set master function to
Phage phi 11 orf12 protein homolog
7/31/2018
VeronikaV
Assignment projected from fig|259901.1.peg.38 based on identical sequence
This feature is not yet part of a subsystem.
Compare Regions For fig|320843.3.peg.6
The chromosomal region of the focus gene (top) is compared with four similar organisms. The graphic is centered on the focus gene, which is red and numbered 1. Sets of genes with similar sequence are grouped with the same number and color. Genes whose relative position is conserved in at least four other species are functionally coupled and share gray background boxes. The size of the region and the number of genomes may be reset. Click on any arrow in the display to refocus the comparison on that gene. The focus gene always points to the right, even if it is located on the minus strand.