Annotation Overview for fig|320834.3.peg.49 in Bacteriophage 69:
Phage phi 11 orf12 protein homolog

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current assignment	Phage phi 11 orf12 protein homolog
taxonomy id	320834	contig	NC_007048 (42,732bp)
internal links	genome browser | feature evidence | sequence	ACH Annotation Clearinghouse (ACH) The Annotation Clearinghouse offers a mapping of genes which are identical in sequence except for the start region (due to differences in start calling). [?]	show essentially identical genes
annotation history		run tool	Psi-BlastTMpredTMHMMGram negative PSORTGram negative SignalPGram positive PSORTGram positive SignalPLipoPRadarPPSearchGram negative CELLOGram positive CELLOProDomPDBRNAFold
CDD link	show cdd
PATtyfam	PGF_00341064: hypothetical protein
edit functional role	Phage phi 11 orf12 protein homolog
aliases	YP_239613.1 gi|66395308	propagation lock	Unlocked Toggle lock

Annotation History (history of similar genes)

Date	Annotator	Annotation
11/9/2005	ncbi	Set master function to ORF015
12/1/2005	automated_assignments	Set master function to ORF016
6/29/2006	SvetaG	Set master function to Hypothetical protein, phi-ETA orf17 homolog [SA bacteriophages 11, Mu50B]
7/12/2009	RobE	Set master function to Phage protein
5/3/2018	annotation_transfer	Migrating 6 annotations for fig|320834.3.peg.49 from core seed (no function assignment necessary) at 2018-05-04 01:15:04
5/3/2018	VeronikaV	batch assignment start for 'Hypothetical%20protein%2C%20phi-ETA%20orf17%20homolog%20%5BSA%20bacteriophages%2011%2C%20Mu50B%5D' fig|320846.3.peg.55 options
5/3/2018	VeronikaV	Skipping assignment to Hypothetical protein, phi-ETA orf17 homolog [SA bacteriophages 11, Mu50B]
5/3/2018	VeronikaV	Assignment projected from fig|320846.3.peg.55 based on identical sequence
5/3/2018	VeronikaV	batch assignment end for 'Hypothetical%20protein%2C%20phi-ETA%20orf17%20homolog%20%5BSA%20bacteriophages%2011%2C%20Mu50B%5D'
5/3/2018	VeronikaV	batch assignment start for 'Hypothetical%20protein%2C%20phi-ETA%20orf17%20homolog%20%5BSA%20bacteriophages%2011%2C%20Mu50B%5D' fig|320843.3.peg.6 options
5/3/2018	VeronikaV	batch assignment end for 'Hypothetical%20protein%2C%20phi-ETA%20orf17%20homolog%20%5BSA%20bacteriophages%2011%2C%20Mu50B%5D'
5/4/2018	VeronikaV	Set master function to Hypothetical protein, phi-ETA orf17 homolog [SA bacteriophages 11, Mu50B]
5/4/2018	VeronikaV	Assignment projected from fig|259901.1.peg.38 based on identical sequence
5/4/2018	annotation_transfer	Migrating 2 annotations for fig|320834.3.peg.49 from core seed (no function assignment necessary) at 2018-05-05 01:15:16
5/4/2018	VeronikaV	batch assignment start for 'Hypothetical%20protein%2C%20phi-ETA%20orf17%20homolog%20%5BSA%20bacteriophages%2011%2C%20Mu50B%5D' fig|320843.3.peg.6 options
5/4/2018	VeronikaV	batch assignment end for 'Hypothetical%20protein%2C%20phi-ETA%20orf17%20homolog%20%5BSA%20bacteriophages%2011%2C%20Mu50B%5D'
7/30/2018	annotation_transfer	Migrating 4 annotations for fig|320834.3.peg.49 from core seed (no function assignment necessary) at 2018-07-31 01:15:04
7/30/2018	VeronikaV	batch assignment start for 'Phage%20phi%2011%20orf12%20protein%20homolog' fig|387910.2.peg.15 options return_value: all_lists annotation: Role%20changed%20from%20%27Hypothetical%20protein%2C%20phi-ETA%20orf17%20homolog%20%5BSA%20bacteriophages%2011%2C%20Mu50B%5D%27%20to%20%27Phage%20phi%2011%20orf12%20protein%20homolog%27
7/30/2018	VeronikaV	Skipping assignment to Phage phi 11 orf12 protein homolog
7/30/2018	VeronikaV	Assignment projected from fig|387910.2.peg.15 based on identical sequence
7/30/2018	VeronikaV	batch assignment end for 'Phage%20phi%2011%20orf12%20protein%20homolog'
7/31/2018	VeronikaV	Set master function to Phage phi 11 orf12 protein homolog
7/31/2018	VeronikaV	Assignment projected from fig|259901.1.peg.38 based on identical sequence

We have assigned the function "Phage phi 11 orf12 protein homolog" to the encoded protein. The protein occurs in 1 subsystem: "Staphylococcal phi-Mu50B-like prophages". In "Staphylococcal phi-Mu50B-like prophages", it appears to play a functional role that we have not associated with any other gene.

The chromosomal region of the focus gene (top) is compared with four similar organisms. The graphic is centered on the focus gene, which is red and numbered 1. Sets of genes with similar sequence are grouped with the same number and color. Genes whose relative position is conserved in at least four other species are functionally coupled and share gray background boxes. The size of the region and the number of genomes may be reset. Click on any arrow in the display to refocus the comparison on that gene. The focus gene always points to the right, even if it is located on the minus strand.