Annotation Overview for fig|291331.3.peg.2243 in Xanthomonas oryzae pv. oryzae KACC10331:
Type IV fimbrial biogenesis protein PilY1
[to old protein page] | current assignment | Type IV fimbrial biogenesis protein PilY1 | ||||||
|---|---|---|---|---|---|---|---|
| taxonomy id | 291331 | contig | |||||
| internal links | genome browser | feature evidence | sequence | ACH [?] | show essentially identical genes | ||||
| annotation history | run tool | ||||||
| FigFam | FIG00007479 | CDD link | show cdd | ||||
| PATtyfam | PGF_00063675: Type IV fimbrial biogenesis protein PilY1 PLF_338_00005453: Type IV fimbrial biogenesis protein PilY1 | ||||||
| alignments and trees | 1 alignments and trees | ||||||
| edit functional role | Type IV fimbrial biogenesis protein PilY1 | ||||||
| data base cross references (dbxref) | aliases | propagation lock | |||||
This feature is part of a subsystem
Reasons for Current Assignment
We have assigned the function "Type IV fimbrial biogenesis protein PilY1" to the encoded protein.
The protein occurs in 1 subsystem: "Type IV pilus". In "Type IV pilus", it appears to play a
functional role that we have not associated with any other gene, and it occurs in close proximity on
the chromosome with 5 other genes from the same subsystem.
Compare Regions For fig|291331.3.peg.2243
The chromosomal region of the focus gene (top) is compared with four similar organisms. The graphic is centered on the focus gene, which is red and numbered 1. Sets of genes with similar sequence are grouped with the same number and color. Genes whose relative position is conserved in at least four other species are functionally coupled and share gray background boxes. The size of the region and the number of genomes may be reset. Click on any arrow in the display to refocus the comparison on that gene. The focus gene always points to the right, even if it is located on the minus strand.
