Annotation Overview for fig|272626.9.peg.1784 in Listeria innocua Clip11262:
Phage integrase

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current assignment	Phage integrase
taxonomy id	272626	contig	NC_003212 (3,011,208bp)NC_003383 (81,905bp)
internal links	genome browser | feature evidence | sequence	ACH Annotation Clearinghouse (ACH) The Annotation Clearinghouse offers a mapping of genes which are identical in sequence except for the start region (due to differences in start calling). [?]	show essentially identical genes
annotation history		run tool	Psi-BlastTMpredTMHMMGram negative PSORTGram negative SignalPGram positive PSORTGram positive SignalPLipoPRadarPPSearchGram negative CELLOGram positive CELLOProDomPDBRNAFold
FigFam	FIG01306474	CDD link	show cdd
PATtyfam	PGF_00014821: Integrase PLF_1637_00003153: Integrase
alignments and trees	6 alignments and trees	PATRIC link	20300235
edit functional role	Phage integrase
aliases	geneID|1130402 gi|16800811 locus|lin1743 protein_id|NP_471079.1	propagation lock	Unlocked Toggle lock

Annotation History (history of similar genes)

Date	Annotator	Annotation
12/2/2009	rapid_propogation	Set function to hypothetical protein from original annotations
12/2/2009	rapid_propogation	Set function to phage integrase, putative based on unreliable automated assignments
6/16/2010	fig	Set master function to Integrase
1/29/2018	VeronikaV	Set master function to Phage integrase
1/29/2018	VeronikaV	Assignment projected from fig|272626.1.peg.1244 based on identical sequence

The chromosomal region of the focus gene (top) is compared with four similar organisms. The graphic is centered on the focus gene, which is red and numbered 1. Sets of genes with similar sequence are grouped with the same number and color. Genes whose relative position is conserved in at least four other species are functionally coupled and share gray background boxes. The size of the region and the number of genomes may be reset. Click on any arrow in the display to refocus the comparison on that gene. The focus gene always points to the right, even if it is located on the minus strand.