Annotation Overview for fig|196620.1.peg.2267 in Staphylococcus aureus subsp. aureus MW2:
Isopentenyl-diphosphate delta-isomerase, FMN-dependent (EC 5.3.3.2)

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current assignmentIsopentenyl-diphosphate delta-isomerase, FMN-dependent (EC 5.3.3.2)EC Number 5.3.3.2
taxonomy id196620contig
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PATtyfamPGF_00015737: Isopentenyl-diphosphate delta-isomerase, FMN-dependent (EC 5.3.3.2)
PLF_1279_00004371: Isopentenyl-diphosphate delta-isomerase, FMN-dependent (EC 5.3.3.2)
alignments and trees1 alignments and trees
edit functional roleIsopentenyl-diphosphate delta-isomerase, FMN-dependent (EC 5.3.3.2)
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This feature is part of a subsystem
  • In Archaeal lipids its role is Isopentenyl-diphosphate delta-isomerase, FMN-dependent (EC 5.3.3.2).
  • In Isoprenoid Biosynthesis its role is Isopentenyl-diphosphate delta-isomerase, FMN-dependent (EC 5.3.3.2).
  • In Isoprenoid Biosynthesis: Interconversions its role is Isopentenyl-diphosphate delta-isomerase, FMN-dependent (EC 5.3.3.2).
  • In archaeal lipids bobik its role is Isopentenyl-diphosphate delta-isomerase, FMN-dependent (EC 5.3.3.2).
  • In Isoprenoid Biosynthesis its role is Isopentenyl-diphosphate delta-isomerase, FMN-dependent (EC 5.3.3.2).
  • In Isoprenoid Biosynthesis: Interconversions its role is Isopentenyl-diphosphate delta-isomerase, FMN-dependent (EC 5.3.3.2).
  • Reasons for Current Assignment

    We have assigned the function "Isopentenyl-diphosphate delta-isomerase, FMN-dependent (EC 5.3.3.2)" to the encoded protein. The protein occurs in 3 subsystems: "Archaeal lipids", "Isoprenoid Biosynthesis", and "Isoprenoid Biosynthesis: Interconversions". In "Archaeal lipids", it appears to play a functional role that we have not associated with any other gene. In "Isoprenoid Biosynthesis", it appears to play a functional role that we have not associated with any other gene. In "Isoprenoid Biosynthesis: Interconversions", it appears to play a functional role that we have not associated with any other gene. The function of genes having the same functional roles have been described in Thermococcus kodakarensis (15882994) and Methanothermobacter thermautotrophicus (14996812). These are homologous proteins which implement the same function.

    Compare Regions For fig|196620.1.peg.2267

    The chromosomal region of the focus gene (top) is compared with four similar organisms. The graphic is centered on the focus gene, which is red and numbered 1. Sets of genes with similar sequence are grouped with the same number and color. Genes whose relative position is conserved in at least four other species are functionally coupled and share gray background boxes. The size of the region and the number of genomes may be reset. Click on any arrow in the display to refocus the comparison on that gene. The focus gene always points to the right, even if it is located on the minus strand.