Welcome to the SEED Viewer - a read-only browser of the curated SEED data.
For more information about The SEED please visit theSEED.org. For daily updates on SEED activity visit the Daily SEED
The Annotation Clearinghouse offers a mapping of genes which are identical in sequence except for the start region (due to differences in start calling).
Set master function to
DNA polymerase (EC 2.7.7.7)
9/2/2005
annotation_repair
Annotation for existing assignment
hypothetical protein
that did not match latest annotation
DNA polymerase (EC 2.7.7.7)
9/2/2005
annotation_repair
Set master function to
hypothetical protein
7/13/2009
RobE
Set master function to
DNA polymerase, phage-associated
12/7/2011
cleanup_2011_12_7
Set master function to
phage-related DNA polymerase
12/7/2011
cleanup_2011_12_7
recalled functions using kmers
7/26/2018
annotation_transfer
Migrating 2 annotations for fig|155920.1.peg.946 from core seed (including function assignment) at 2018-07-27 01:15:07
7/26/2018
gjo
Migrate assignment from phage-related DNA polymerase to DNA polymerase I (EC 2.7.7.7), phage-associated
7/26/2018
gjo
Assignment projected from fig|320839.3.peg.50 based on indirect similarity through fig|2026101.3.peg.17
7/27/2018
gjo
Set master function to
DNA polymerase I (EC 2.7.7.7), phage-associated
7/30/2018
annotation_transfer
Migrating 2 annotations for fig|155920.1.peg.946 from core seed (including function assignment) at 2018-07-31 01:15:04
7/30/2018
VeronikaV
Migrate assignment from DNA polymerase I (EC 2.7.7.7), phage-associated to Phage DNA polymerase I (EC 2.7.7.7)
7/30/2018
VeronikaV
Role changed from 'DNA polymerase I (EC 2.7.7.7), phage-associated' to 'Phage DNA polymerase I (EC 2.7.7.7)'
7/31/2018
VeronikaV
Set master function to
Phage DNA polymerase I (EC 2.7.7.7)
This feature is not yet part of a subsystem.
Compare Regions For fig|155920.1.peg.946
The chromosomal region of the focus gene (top) is compared with four similar organisms. The graphic is centered on the focus gene, which is red and numbered 1. Sets of genes with similar sequence are grouped with the same number and color. Genes whose relative position is conserved in at least four other species are functionally coupled and share gray background boxes. The size of the region and the number of genomes may be reset. Click on any arrow in the display to refocus the comparison on that gene. The focus gene always points to the right, even if it is located on the minus strand.
