Welcome to the SEED Viewer - a read-only browser of the curated SEED data.
For more information about The SEED please visit theSEED.org. For daily updates on SEED activity visit the Daily SEED
The Annotation Clearinghouse offers a mapping of genes which are identical in sequence except for the start region (due to differences in start calling).
Annotation for existing assignment
Prophage antirepressor
9/2/2005
annotation_repair
Set master function to
Prophage antirepressor
7/13/2009
RobE
Set master function to
Phage Rha protein
1/14/2012
md5_consistency
Set master function to
similar to Prophage antirepressor
1/14/2012
md5_consistency
assignment made to reconcile multiple functions for the same md5
9/25/2018
annotation_transfer
Migrating 2 annotations for fig|155920.1.peg.1953 from core seed (including function assignment) at 2018-09-26 01:15:07
9/25/2018
vvons
Migrate assignment from similar to Prophage antirepressor to Phage antirepressor protein
9/25/2018
vvons
Assignment projected from fig|445970.5.peg.130 based on tree proximity
9/26/2018
vvons
Set master function to
Phage antirepressor protein
This feature is not yet part of a subsystem.
Compare Regions For fig|155920.1.peg.1953
The chromosomal region of the focus gene (top) is compared with four similar organisms. The graphic is centered on the focus gene, which is red and numbered 1. Sets of genes with similar sequence are grouped with the same number and color. Genes whose relative position is conserved in at least four other species are functionally coupled and share gray background boxes. The size of the region and the number of genomes may be reset. Click on any arrow in the display to refocus the comparison on that gene. The focus gene always points to the right, even if it is located on the minus strand.
