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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
 The SEED


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Protein fig|93061.5.peg.1892: Staphylococcus aureus subsp. aureus NCTC 8325

This feature in The SEED Viewer

NCBI Taxonomy Id: 93061

Current Assignment: Phage protein
Translate Function Assignments


Context on contig NC_007795 from base 1958667 to 1970246 (11580 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
1880 1959446 1958667 780 -           Phage phi 11 orf12 protein homolog locus|SAOUHSC_02072, protein_id|YP_500565.1, gi|88195756, geneID|3919759
1881 1959983 1959447 537 - 0         Phage phi 11 orf61 protein homolog locus|SAOUHSC_02073, protein_id|YP_500566.1, gi|88195757, geneID|3919760
1882 1960256 1959996 261 - 12         Phage phi 11 orf11 protein homolog locus|SAOUHSC_02074, protein_id|YP_500567.1, gi|88195758, geneID|3919761
1883 1960566 1960237 330 - -20         Phage protein locus|SAOUHSC_02075, protein_id|YP_500568.1, gi|88195759, geneID|3919762
1884 1960817 1960656 162 - 89         Phage phi 11 orf10a protein homolog locus|SAOUHSC_02076, protein_id|YP_500569.1, gi|88195760, geneID|3919763
1885 1961031 1960810 222 - -8         Phage phi 11 orf10 protein homolog locus|SAOUHSC_02077, protein_id|YP_500570.1, gi|88195761, geneID|3919764
1886 1961494 1961045 450 - 13         Phage phi 11 orf9 protein homolog locus|SAOUHSC_02078, protein_id|YP_500571.1, gi|88195762, geneID|3919765
1887 1961760 1961536 225 - 41         Phage phi 11 orf8 protein homolog locus|SAOUHSC_02079, protein_id|YP_500572.1, gi|88195763, geneID|3919766
1888 1962552 1961761 792 - 0         Phage antirepressor protein locus|SAOUHSC_02080, protein_id|YP_500573.1, gi|88195764, geneID|3919767
1889 1963017 1962709 309 - 156         Phage protein locus|SAOUHSC_02081, protein_id|YP_500574.1, gi|88195765, geneID|3919768
1890 1963250 1963032 219 - 14         Phage transcriptional regulator cro locus|SAOUHSC_02083, protein_id|YP_500575.1, gi|88195766, geneID|3919769
1891 1963392 1964111 720 + 141         Phage repressor protein cI locus|SAOUHSC_02084, protein_id|YP_500576.1, gi|88195767, geneID|3919770
1892 1964181 1964348 168 + 69         Phage protein locus|SAOUHSC_02085, protein_id|YP_500577.1, gi|88195768, geneID|3919771
1893 1964508 1964693 186 + 159         Phage phi 11 orf4 protein homolog locus|SAOUHSC_02086, protein_id|YP_500578.1, gi|88195769, geneID|3919772
1894 1964729 1965634 906 + 35         Phage phi 11 orf3 protein homolog locus|SAOUHSC_02087, protein_id|YP_500579.1, gi|88195770, geneID|3919773
1895 1965883 1966929 1047 + 248         Phage integrase locus|SAOUHSC_02089, protein_id|YP_500581.1, gi|88195772, geneID|3919775
1896 1966974 1968119 1146 + 44     1: 1   Hypothetical protein SAV1877 locus|SAOUHSC_02090, protein_id|YP_500582.1, gi|88195773, geneID|3919776
1897 1968909 1968379 531 - 259     1: 1   Acyl-CoA hydrolase (EC 3.1.2.20) locus|SAOUHSC_02091, protein_id|YP_500583.1, gi|88195774, geneID|3919777
1898 1970246 1968999 1248 - 89     2: 2 1   Aminopeptidase S (Leu, Val, Phe, Tyr preference) (EC 3.4.11.24) locus|SAOUHSC_02092, protein_id|YP_500584.1, gi|88195775, geneID|3919778

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|93061.5.peg.1892 Phage protein
MKITNCKIKKETIVYEVLTSGNQPFTYELPKDLSSHNARKYLEFISQKIDGDKLN

MD5 = 2ebc23b9dc0483fa263b20d457b03fa8


  DNA Sequence

>fig|93061.5.peg.1892 Phage protein
atgaaaataactaattgcaaaataaaaaaagaaactatagtatatgaagttttaactagt
ggtaatcaaccattcacttatgagttacctaaagatttatcgtcacataatgcgcgtaaa
tacttggaatttatttcacaaaaaatagatggcgataagttaaattaa


  DNA with Flanking Sequence

>fig|93061.5.peg.1892 Phage protein
acgcaaatgagcaattagatgaacagaataaagtcacttctatagatgaatataaagagt
ctaaactagtatcgtatattgcatgtggtgcaactggtgctggcataggagaagaattat
atgatgacatattgcatgaagaagtattttttaaagaagacgaaacgccatcaaatgctg
atttttgtattttagttaatggtgattcaatggaacctatgttaaaacaaggaacatacg
cttttattaagaaagaagattctattaaagatggtacaattgcactcgttgtattagatg
gagtaagtcttatcaagcgtgtagatatatgcgaagactatattaatttggtatctctaa
atccgaagtatgatgatatcaaagtcgcttcgtttagtaatattaaagtaatgggcaaag
ttgtattgtgattaatagcgcctatatggcactttaatataaaagacgtctatttcagca
gtgtttaaaaggagtttataatgaaaataactaattgcaaaataaaaaaagaaactatag
tatatgaagttttaactagtggtaatcaaccattcacttatgagttacctaaagatttat
cgtcacataatgcgcgtaaatacttggaatttatttcacaaaaaatagatggcgataagt
taaattaattcaaagaataaagtaacttcataaagagtacgaagaaaacgatctaatgac
cgaacttattcttgaatatttagtaaaaaagtatgttgaagaagaatataggaaataagc
tcctatacggcgctttaacataaaaagtaaaggagaaataaaaaattatggaatcatatg
aagaaattgagcatatacacattaacactggtagaaaaaaacttacacaagaacaaatag
aagaagccaaagcttttatagacagtcaaggatttaaagatatgattcgagaagctaaag
agtcacgtcaaagagttatggagtctaaaattaccgatagaactaaaatgtgattaatag
cgcctatgtggcgtgaggaggatgagggatggaagagaaacaatacttatggagatataa
cgatatagaaaaaagaatgaatgaacttcacaaaaaatataaagaattagtggatatatt
ttttggtgatgtaatagataaaaatact


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
cmr|NT05SA1887 Staphylococcus aureus NCTC 8325     conserved hypothetical protein
fig|320834.3.peg.37 Bacteriophage 69 FIG   Phage protein
fig|320835.3.peg.61 Bacteriophage 53 FIG   Phage protein
fig|53369.2.peg.5 Siphoviridae Staphylococcus phage 80alpha FIG   Phage protein
fig|546342.3.peg.1816 Staphylococcus aureus subsp. aureus str. JKD6008 FIG   Phage protein
fig|546343.3.peg.354 Staphylococcus aureus subsp. aureus str. JKD6009 FIG   Phage protein
fig|553567.3.peg.1872 Staphylococcus aureus A5948 FIG   Phage protein
fig|585152.3.peg.1976 Staphylococcus aureus subsp. aureus D139 FIG   Phage protein
fig|585155.3.peg.2613 Staphylococcus aureus subsp. aureus H19 FIG   Phage protein
fig|644279.4.peg.2156 Staphylococcus aureus subsp. aureus 132 FIG   Phage protein
fig|93061.3.peg.1969 Staphylococcus aureus subsp. aureus NCTC 8325 FIG   Phage protein
gb|AAX90821.1 Bacteriophage 69     ORF096
gb|AAX90898.1 Bacteriophage 53     ORF103
gb|ABD31136.1 Staphylococcus aureus subsp. aureus NCTC 8325     conserved hypothetical phage protein
gb|ABF71576.1 Staphylococcus phage 80alpha     hypothetical protein
gi|103058633 Staphylococcus phage 80alpha NCBI   hypothetical protein
gi|148717847 Staphylococcus phage 80alpha NCBI   hypothetical protein SPV-80A_gp05
gi|221138781 Staphylococcus aureus subsp. aureus str. JKD6008 NCBI   hypothetical protein SauraJK_09095
gi|221140345 Staphylococcus aureus subsp. aureus str. JKD6009 NCBI   hypothetical protein SauraJ_01771
gi|62635710 Bacteriophage 69 NCBI   ORF096
gi|62635787 Bacteriophage 53 NCBI   ORF103
gi|66395359 Staphylococcus phage 69 NCBI   ORF096
gi|66395437 Staphylococcus phage 53 NCBI   ORF103
gi|87203326 Staphylococcus aureus subsp. aureus NCTC 8325 NCBI   conserved hypothetical phage protein
gi|88195768 Staphylococcus aureus subsp. aureus NCTC 8325 NCBI   hypothetical protein SAOUHSC_02085
img|637894711 Staphylococcus aureus aureus NCTC 8325 IMG   hypothetical protein
img|638314020 Bacteriophage 69 IMG   ORF096
img|638314101 Bacteriophage 53 IMG   ORF103
img|641208668 Staphylococcus phage 80alpha IMG   hypothetical protein
kegg|sao:SAOUHSC_02085 Staphylococcus aureus subsp. aureus NCTC 8325 KEGG   hypothetical protein
ref|YP_001285319.1 Staphylococcus phage 80alpha RefSeq   hypothetical protein SPV-80A_gp05
ref|YP_239601.1 Staphylococcus phage 69 RefSeq   ORF096
ref|YP_239682.1 Staphylococcus phage 53 RefSeq   ORF103
ref|YP_500577.1 Staphylococcus aureus subsp. aureus NCTC 8325 RefSeq   hypothetical protein SAOUHSC_02085
ref|ZP_03563583.1 Staphylococcus aureus subsp. aureus str. JKD6008 RefSeq   hypothetical protein SauraJK_09095
ref|ZP_03564838.1 Staphylococcus aureus subsp. aureus str. JKD6009 RefSeq   hypothetical protein SauraJ_01771
tr|A4ZF71 Staphylococcus phage 80alpha TrEMBL   Putative uncharacterized protein
tr|Q2FX21 Staphylococcus aureus (strain NCTC 8325) TrEMBL   Conserved hypothetical phage protein
tr|Q4ZDJ4 Staphylococcus phage 53 TrEMBL   ORF103
tr|Q4ZDS5 Staphylococcus phage 69 TrEMBL   ORF096


  Links to Related Entries in Other Sites

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  Functional Coupling

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  Attributes

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  Protein Families

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