The SEED: an Annotation/Analysis Tool Provided by FIG
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Fid | Start | End | Size (nt) |
Gap | Find best clusters |
Pins | Fc-sc | SS | Ev | Function | Aliases | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1878 | 1958070 | 1957378 | 693 | - | ![]() |
Phage phi 11 orf14 protein homolog | locus|SAOUHSC_02070, protein_id|YP_500563.1, gi|88195754, geneID|3919757 | |||||
1879 | 1958637 | 1958083 | 555 | - | 12 | ![]() |
Phage ssDNA binding protein | locus|SAOUHSC_02071, protein_id|YP_500564.1, gi|88195755, geneID|3919758 | ||||
1880 | 1959446 | 1958667 | 780 | - | 29 | ![]() |
Phage phi 11 orf12 protein homolog | locus|SAOUHSC_02072, protein_id|YP_500565.1, gi|88195756, geneID|3919759 | ||||
1881 | 1959983 | 1959447 | 537 | - | 0 | ![]() |
Phage phi 11 orf61 protein homolog | locus|SAOUHSC_02073, protein_id|YP_500566.1, gi|88195757, geneID|3919760 | ||||
1882 | 1960256 | 1959996 | 261 | - | 12 | ![]() |
Phage phi 11 orf11 protein homolog | locus|SAOUHSC_02074, protein_id|YP_500567.1, gi|88195758, geneID|3919761 | ||||
1883 | 1960566 | 1960237 | 330 | - | -20 | ![]() |
Phage protein | locus|SAOUHSC_02075, protein_id|YP_500568.1, gi|88195759, geneID|3919762 | ||||
1884 | 1960817 | 1960656 | 162 | - | 89 | ![]() |
Phage phi 11 orf10a protein homolog | locus|SAOUHSC_02076, protein_id|YP_500569.1, gi|88195760, geneID|3919763 | ||||
1885 | 1961031 | 1960810 | 222 | - | -8 | ![]() |
Phage phi 11 orf10 protein homolog | locus|SAOUHSC_02077, protein_id|YP_500570.1, gi|88195761, geneID|3919764 | ||||
1886 | 1961494 | 1961045 | 450 | - | 13 | ![]() |
Phage phi 11 orf9 protein homolog | locus|SAOUHSC_02078, protein_id|YP_500571.1, gi|88195762, geneID|3919765 | ||||
1887 | 1961760 | 1961536 | 225 | - | 41 | ![]() |
Phage phi 11 orf8 protein homolog | locus|SAOUHSC_02079, protein_id|YP_500572.1, gi|88195763, geneID|3919766 | ||||
1888 | 1962552 | 1961761 | 792 | - | 0 | ![]() |
Phage antirepressor protein | locus|SAOUHSC_02080, protein_id|YP_500573.1, gi|88195764, geneID|3919767 | ||||
1889 | 1963017 | 1962709 | 309 | - | 156 | ![]() |
Phage protein | locus|SAOUHSC_02081, protein_id|YP_500574.1, gi|88195765, geneID|3919768 | ||||
1890 | 1963250 | 1963032 | 219 | - | 14 | ![]() |
Phage transcriptional regulator cro | locus|SAOUHSC_02083, protein_id|YP_500575.1, gi|88195766, geneID|3919769 | ||||
1891 | 1963392 | 1964111 | 720 | + | 141 | ![]() |
Phage repressor protein cI | locus|SAOUHSC_02084, protein_id|YP_500576.1, gi|88195767, geneID|3919770 | ||||
1892 | 1964181 | 1964348 | 168 | + | 69 | ![]() |
Phage protein | locus|SAOUHSC_02085, protein_id|YP_500577.1, gi|88195768, geneID|3919771 | ||||
1893 | 1964508 | 1964693 | 186 | + | 159 | ![]() |
Phage phi 11 orf4 protein homolog | locus|SAOUHSC_02086, protein_id|YP_500578.1, gi|88195769, geneID|3919772 | ||||
1894 | 1964729 | 1965634 | 906 | + | 35 | ![]() |
Phage phi 11 orf3 protein homolog | locus|SAOUHSC_02087, protein_id|YP_500579.1, gi|88195770, geneID|3919773 | ||||
1895 | 1965883 | 1966929 | 1047 | + | 248 | ![]() |
Phage integrase | locus|SAOUHSC_02089, protein_id|YP_500581.1, gi|88195772, geneID|3919775 | ||||
1896 | 1966974 | 1968119 | 1146 | + | 44 | ![]() |
1: 1 | Hypothetical protein SAV1877 | locus|SAOUHSC_02090, protein_id|YP_500582.1, gi|88195773, geneID|3919776 |
Annotation History / View All Related Annotations | Help on Annotations |
Id | Organism | Who | ASSIGN | Assignment |
---|---|---|---|---|
GO:0043565 | F:sequence-specific DNA binding | |||
cmr|NT05SA1885 | Staphylococcus aureus NCTC 8325 | conserved hypothetical protein | ||
fig|12360.1.peg.6 | Staphylococcus aureus phage phi 11 | FIG | Phage transcriptional regulator cro | |
fig|320834.3.peg.39 | Bacteriophage 69 | FIG | Phage transcriptional regulator cro | |
fig|320835.3.peg.63 | Bacteriophage 53 | FIG | Phage transcriptional regulator cro | |
fig|320837.3.peg.43 | Bacteriophage 42e | FIG | Phage transcriptional regulator cro | |
fig|387908.2.peg.5 | Siphoviridae Staphylococcus aureus phage phiNM2 | FIG | Phage transcriptional regulator cro | |
fig|426430.8.peg.1078 | Staphylococcus aureus subsp. aureus str. Newman | FIG | Phage transcriptional regulator cro | |
fig|452948.4.peg.2767 | Staphylococcus aureus 930918-3 | FIG | Phage transcriptional regulator cro | |
fig|585147.3.peg.1544 | Staphylococcus aureus subsp. aureus A017934/97 | FIG | Phage transcriptional regulator cro | |
fig|680649.3.peg.2625 | Staphylococcus aureus subsp. aureus MR1 | FIG | Phage transcriptional regulator cro | |
fig|93061.3.peg.1967 | Staphylococcus aureus subsp. aureus NCTC 8325 | FIG | Phage transcriptional regulator cro | |
gb|AAL82234.1 | Staphylococcus aureus phage phi 11 | cro-like repressor | ||
gb|AAX90808.1 | Bacteriophage 69 | ORF069 | ||
gb|AAX90886.1 | Bacteriophage 53 | ORF073 | ||
gb|AAX91173.1 | Bacteriophage 42e | ORF076 | ||
gb|ABD31134.1 | Staphylococcus aureus subsp. aureus NCTC 8325 | bacteriophage L54a, Cro-related protein | ||
gb|ABF73099.1 | Staphylococcus aureus phage phiNM2 | cro-like repressor | ||
gi|104641721 | Staphylococcus aureus phage phiNM2 | NCBI | cro-like repressor | |
gi|18920493 | Staphylococcus aureus phage phi 11 | NCBI | cro-like repressor | |
gi|29028569 | Staphylococcus phage 11 | NCBI | cro-like repressor | |
gi|62635697 | Bacteriophage 69 | NCBI | ORF069 | |
gi|62635775 | Bacteriophage 53 | NCBI | ORF073 | |
gi|62636062 | Bacteriophage 42e | NCBI | ORF076 | |
gi|66395346 | Staphylococcus phage 69 | NCBI | ORF069 | |
gi|66395425 | Staphylococcus phage 53 | NCBI | ORF073 | |
gi|66395569 | Staphylococcus phage 42E | NCBI | ORF076 | |
gi|87203324 | Staphylococcus aureus subsp. aureus NCTC 8325 | NCBI | bacteriophage L54a, Cro-related protein | |
gi|88195766 | Staphylococcus aureus subsp. aureus NCTC 8325 | NCBI | bacteriophage L54a, Cro-related protein | |
img|637894709 | Staphylococcus aureus aureus NCTC 8325 | IMG | bacteriophage L54a, Cro-related protein | |
img|638297001 | Staphylococcus phage 11 | IMG | cro-like repressor | |
img|638314022 | Bacteriophage 69 | IMG | ORF069 | |
img|638314103 | Bacteriophage 53 | IMG | ORF073 | |
img|638314314 | Bacteriophage 42e | IMG | ORF076 | |
kegg|sao:SAOUHSC_02083 | Staphylococcus aureus subsp. aureus NCTC 8325 | KEGG | bacteriophage L54a, Cro-related protein | |
ref|NP_803259.1 | Staphylococcus phage 11 | RefSeq | cro-like repressor | |
ref|YP_239603.1 | Staphylococcus phage 69 | RefSeq | ORF069 | |
ref|YP_239684.1 | Staphylococcus phage 53 | RefSeq | ORF073 | |
ref|YP_239895.1 | Staphylococcus phage 42E | RefSeq | ORF076 | |
ref|YP_500575.1 | Staphylococcus aureus subsp. aureus NCTC 8325 | RefSeq | bacteriophage L54a, Cro-related protein | |
tr|A0EWP0 | Staphylococcus aureus phage phiNM2 | TrEMBL | Cro-like repressor | |
tr|Q2FX23 | Staphylococcus aureus (strain NCTC 8325) | TrEMBL | Bacteriophage L54a, Cro-related protein | |
tr|Q4ZCY1 | Staphylococcus phage 42E | TrEMBL | ORF076 | |
tr|Q4ZDJ2 | Staphylococcus phage 53 | TrEMBL | ORF073 | |
tr|Q4ZDS3 | Staphylococcus phage 69 | TrEMBL | ORF069 | |
tr|Q8SDX1 | Staphylococcus phage phi11 (Bacteriophage phi-11) | TrEMBL | Cro-like repressor |
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