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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
 The SEED


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Protein fig|93061.5.peg.1886: Staphylococcus aureus subsp. aureus NCTC 8325

This feature in The SEED Viewer

NCBI Taxonomy Id: 93061

Current Assignment: Phage phi 11 orf9 protein homolog
Translate Function Assignments


Context on contig NC_007795 from base 1955006 to 1966929 (11924 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
1875 1956247 1955006 1242 -           Phage DNA helicase (EC 3.6.4.12) locus|SAOUHSC_02067, protein_id|YP_500560.1, gi|88195751, geneID|3919754
1876 1956600 1956244 357 - -4         Hypothetical protein, SAB1742c homolog [SA bacteriophages 11, Mu50B] locus|SAOUHSC_02068, protein_id|YP_500561.1, gi|88195752, geneID|3919755
1877 1957406 1956600 807 - -1         Phage replication initiation protein locus|SAOUHSC_02069, protein_id|YP_500562.1, gi|88195753, geneID|3919756
1878 1958070 1957378 693 - -29         Phage phi 11 orf14 protein homolog locus|SAOUHSC_02070, protein_id|YP_500563.1, gi|88195754, geneID|3919757
1879 1958637 1958083 555 - 12         Phage ssDNA binding protein locus|SAOUHSC_02071, protein_id|YP_500564.1, gi|88195755, geneID|3919758
1880 1959446 1958667 780 - 29         Phage phi 11 orf12 protein homolog locus|SAOUHSC_02072, protein_id|YP_500565.1, gi|88195756, geneID|3919759
1881 1959983 1959447 537 - 0         Phage phi 11 orf61 protein homolog locus|SAOUHSC_02073, protein_id|YP_500566.1, gi|88195757, geneID|3919760
1882 1960256 1959996 261 - 12         Phage phi 11 orf11 protein homolog locus|SAOUHSC_02074, protein_id|YP_500567.1, gi|88195758, geneID|3919761
1883 1960566 1960237 330 - -20         Phage protein locus|SAOUHSC_02075, protein_id|YP_500568.1, gi|88195759, geneID|3919762
1884 1960817 1960656 162 - 89         Phage phi 11 orf10a protein homolog locus|SAOUHSC_02076, protein_id|YP_500569.1, gi|88195760, geneID|3919763
1885 1961031 1960810 222 - -8         Phage phi 11 orf10 protein homolog locus|SAOUHSC_02077, protein_id|YP_500570.1, gi|88195761, geneID|3919764
1886 1961494 1961045 450 - 13         Phage phi 11 orf9 protein homolog locus|SAOUHSC_02078, protein_id|YP_500571.1, gi|88195762, geneID|3919765
1887 1961760 1961536 225 - 41         Phage phi 11 orf8 protein homolog locus|SAOUHSC_02079, protein_id|YP_500572.1, gi|88195763, geneID|3919766
1888 1962552 1961761 792 - 0         Phage antirepressor protein locus|SAOUHSC_02080, protein_id|YP_500573.1, gi|88195764, geneID|3919767
1889 1963017 1962709 309 - 156         Phage protein locus|SAOUHSC_02081, protein_id|YP_500574.1, gi|88195765, geneID|3919768
1890 1963250 1963032 219 - 14         Phage transcriptional regulator cro locus|SAOUHSC_02083, protein_id|YP_500575.1, gi|88195766, geneID|3919769
1891 1963392 1964111 720 + 141         Phage repressor protein cI locus|SAOUHSC_02084, protein_id|YP_500576.1, gi|88195767, geneID|3919770
1892 1964181 1964348 168 + 69         Phage protein locus|SAOUHSC_02085, protein_id|YP_500577.1, gi|88195768, geneID|3919771
1893 1964508 1964693 186 + 159         Phage phi 11 orf4 protein homolog locus|SAOUHSC_02086, protein_id|YP_500578.1, gi|88195769, geneID|3919772
1894 1964729 1965634 906 + 35         Phage phi 11 orf3 protein homolog locus|SAOUHSC_02087, protein_id|YP_500579.1, gi|88195770, geneID|3919773
1895 1965883 1966929 1047 + 248         Phage integrase locus|SAOUHSC_02089, protein_id|YP_500581.1, gi|88195772, geneID|3919775

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|93061.5.peg.1886 Phage phi 11 orf9 protein homolog
MNALYKTTLLTTMAVVTWKVWKIERNTRKPVINRNDFSKESTAETIERHSDPDSGIKLLK
AFSDFTKQAEKQKPTLGEVYRRNKPELPTVTLDENGLFINDFRVPYVLEEGVNVKKSMNN
LYKVSLDFFAKSIIADNYEADNPENQQLF

MD5 = ccb577a1991dd4ddde23981900daad2f


  DNA Sequence

>fig|93061.5.peg.1886 Phage phi 11 orf9 protein homolog
atgaacgcactatacaaaacaaccctcctcaccacaatggcagttgtgacgtggaaggtt
tggaagattgaacgaaatacgagaaagcctgtaatcaatagaaatgattttagtaaagag
tctacagcagaaacgattgagcgacacagtgatcctgattcaggaataaaactacttaag
gcattttccgacttcactaaacaagctgaaaagcaaaaacctacactaggagaagtttat
agacggaacaaacctgaattaccaaccgttactttagacgaaaacggactgtttataaat
gattttagggtgccttatgtacttgaggaaggggttaacgtaaagaaatctatgaacaac
ctatataaggtcagtttggactttttcgctaaaagtattattgcagataattacgaagca
gataacccagagaatcaacagttattttaa


  DNA with Flanking Sequence

>fig|93061.5.peg.1886 Phage phi 11 orf9 protein homolog
aagttaaacaaactactacacgaagctagactacaacgaaaagtaaataaacagtgggtg
ctttactcagaacacatgggcaagagttacacagattcagacactataacaattgtgcgt
tctgatggcagagaagacacagttttacaaactagatggacacaaaaaggcagattgaaa
atacatgaaatcatgactgaattcggttatgaagctaatttagggggagcgtaaatgaca
ccagaacaaaaagaaaagctaaacaatatagtattaacactttatgcagttaaagaaaac
aaaagtcaaacatacacacacaaagatactcttactgtgacatatgcaggcgagattgag
cacacttacgaagtcgacagagagaaacaccttgaatcaatgattgagtgggcaattgac
caaatcgaacagcactttgatttagacgaagaagaataacacacacaattgaacaaacaa
cttaataggaggaattacaaatgaacgcactatacaaaacaaccctcctcaccacaatgg
cagttgtgacgtggaaggtttggaagattgaacgaaatacgagaaagcctgtaatcaata
gaaatgattttagtaaagagtctacagcagaaacgattgagcgacacagtgatcctgatt
caggaataaaactacttaaggcattttccgacttcactaaacaagctgaaaagcaaaaac
ctacactaggagaagtttatagacggaacaaacctgaattaccaaccgttactttagacg
aaaacggactgtttataaatgattttagggtgccttatgtacttgaggaaggggttaacg
taaagaaatctatgaacaacctatataaggtcagtttggactttttcgctaaaagtatta
ttgcagataattacgaagcagataacccagagaatcaacagttattttaaaggaggaaaa
gatatgatgaaaaatagtttgcaagctaaagaacttgcggtaattttatctgtttctaaa
tccaaagcaggacaaataataagagaactgaataaagagcttgaagatgaaggatacatt
gcgatacgaggcagaataccagtccaattagctaggaaaaaattcccttatcacgactta
tcagaccagagaataatggaggagttgaaaaaagaaaatgagtaacatttataaaagcta
cctagtagcagtactatgcttcacagtcttagcgattgtacttatgccgtttctatactt
cactacagcatggtcaattgcaggattcgcaagtatcgcaacattcatattctataagga
atacttttatgaagaatgaaaaaactgctacttgcgccaacaagtaacaataagtgttca
tcaaaatatacaacttaattaaatcaaaatatacggaggtagtcaactatgactgaaaat
attaaaactg


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
cmr|NT05SA1881 Staphylococcus aureus NCTC 8325     conserved hypothetical protein
fig|12360.1.peg.9 Staphylococcus aureus phage phi 11 FIG   Phage phi 11 orf9 protein homolog
fig|320837.3.peg.47 Bacteriophage 42e FIG   Phage phi 11 orf9 protein homolog
fig|585151.3.peg.1555 Staphylococcus aureus subsp. aureus C427 FIG   Phage phi 11 orf9 protein homolog
fig|585152.3.peg.1832 Staphylococcus aureus subsp. aureus D139 FIG   Phage phi 11 orf9 protein homolog
fig|93061.3.peg.1963 Staphylococcus aureus subsp. aureus NCTC 8325 FIG   Phage phi 11 orf9 protein homolog
gb|AAL82237.1 Staphylococcus aureus phage phi 11     phi PV83 orf 10-like protein
gb|AAX91141.1 Bacteriophage 42e     ORF029
gb|ABD31130.1 Staphylococcus aureus subsp. aureus NCTC 8325     phi PV83 orf 10-like protein
gi|18920496 Staphylococcus aureus phage phi 11 NCBI   phi PV83 orf 10-like protein
gi|29028572 Staphylococcus phage 11 NCBI   phi PV83 orf 10-like protein
gi|62636030 Bacteriophage 42e NCBI   ORF029
gi|66395537 Staphylococcus phage 42E NCBI   ORF029
gi|87203320 Staphylococcus aureus subsp. aureus NCTC 8325 NCBI   phi PV83 orf 10-like protein
gi|88195762 Staphylococcus aureus subsp. aureus NCTC 8325 NCBI   phi PV83 orf 10-like protein
img|637894705 Staphylococcus aureus aureus NCTC 8325 IMG   phi PV83 orf 10-like protein
img|638297004 Staphylococcus phage 11 IMG   phi PV83 orf 10-like protein
img|638314318 Bacteriophage 42e IMG   ORF029
kegg|sao:SAOUHSC_02078 Staphylococcus aureus subsp. aureus NCTC 8325 KEGG   phi PV83 orf 10-like protein
ref|NP_803262.1 Staphylococcus phage 11 RefSeq   phi PV83 orf 10-like protein
ref|YP_239899.1 Staphylococcus phage 42E RefSeq   ORF029
ref|YP_500571.1 Staphylococcus aureus subsp. aureus NCTC 8325 RefSeq   phi PV83 orf 10-like protein
tr|Q2FX27 Staphylococcus aureus (strain NCTC 8325) TrEMBL   Phi PV83 orf 10-like protein
tr|Q4ZCX7 Staphylococcus phage 42E TrEMBL   ORF029
tr|Q8SDW8 Staphylococcus phage phi11 (Bacteriophage phi-11) TrEMBL   Phi PV83 orf 10-like protein


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  Functional Coupling

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  Attributes

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  Protein Families

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