Protein Page for fig|93061.5.peg.1880

SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov

FIG search

Protein fig|93061.5.peg.1880: Staphylococcus aureus subsp. aureus NCTC 8325

This feature in The SEED Viewer

NCBI Taxonomy Id: 93061

Current Assignment: Phage phi 11 orf12 protein homolog

Translate Function Assignments

Context on contig NC_007795 from base 1953334 to 1964348 (11015 bp)


Fid	Start	End	Size (nt)		Gap	Function	Aliases
1869	1953693	1953334	360	-		Phage phi 11 orf21 protein homolog	locus\|SAOUHSC_02061, protein_id\|YP_500554.1, gi\|88195745, geneID\|3919748
1870	1953963	1953694	270	-	0	Phage transcriptional regulator cro	locus\|SAOUHSC_02062, protein_id\|YP_500555.1, gi\|88195746, geneID\|3919749
1871	1954149	1953964	186	-	0	Phage phi 11 orf19 protein homolog	locus\|SAOUHSC_02063, protein_id\|YP_500556.1, gi\|88195747, geneID\|3919750
1872	1954558	1954154	405	-	4	Phage phi 11 orf18 protein homolog	locus\|SAOUHSC_02064, protein_id\|YP_500557.1, gi\|88195748, geneID\|3919751
1873	1954790	1954569	222	-	10	Phage phi 11 orf17 protein homolog	locus\|SAOUHSC_02065, protein_id\|YP_500558.1, gi\|88195749, geneID\|3919752
1874	1954973	1954794	180	-	3	Phage protein	locus\|SAOUHSC_02066, protein_id\|YP_500559.1, gi\|88195750, geneID\|3919753
1875	1956247	1955006	1242	-	32	Phage DNA helicase (EC 3.6.4.12)	locus\|SAOUHSC_02067, protein_id\|YP_500560.1, gi\|88195751, geneID\|3919754
1876	1956600	1956244	357	-	-4	Hypothetical protein, SAB1742c homolog [SA bacteriophages 11, Mu50B]	locus\|SAOUHSC_02068, protein_id\|YP_500561.1, gi\|88195752, geneID\|3919755
1877	1957406	1956600	807	-	-1	Phage replication initiation protein	locus\|SAOUHSC_02069, protein_id\|YP_500562.1, gi\|88195753, geneID\|3919756
1878	1958070	1957378	693	-	-29	Phage phi 11 orf14 protein homolog	locus\|SAOUHSC_02070, protein_id\|YP_500563.1, gi\|88195754, geneID\|3919757
1879	1958637	1958083	555	-	12	Phage ssDNA binding protein	locus\|SAOUHSC_02071, protein_id\|YP_500564.1, gi\|88195755, geneID\|3919758
1880	1959446	1958667	780	-	29	Phage phi 11 orf12 protein homolog	locus\|SAOUHSC_02072, protein_id\|YP_500565.1, gi\|88195756, geneID\|3919759
1881	1959983	1959447	537	-	0	Phage phi 11 orf61 protein homolog	locus\|SAOUHSC_02073, protein_id\|YP_500566.1, gi\|88195757, geneID\|3919760
1882	1960256	1959996	261	-	12	Phage phi 11 orf11 protein homolog	locus\|SAOUHSC_02074, protein_id\|YP_500567.1, gi\|88195758, geneID\|3919761
1883	1960566	1960237	330	-	-20	Phage protein	locus\|SAOUHSC_02075, protein_id\|YP_500568.1, gi\|88195759, geneID\|3919762
1884	1960817	1960656	162	-	89	Phage phi 11 orf10a protein homolog	locus\|SAOUHSC_02076, protein_id\|YP_500569.1, gi\|88195760, geneID\|3919763
1885	1961031	1960810	222	-	-8	Phage phi 11 orf10 protein homolog	locus\|SAOUHSC_02077, protein_id\|YP_500570.1, gi\|88195761, geneID\|3919764
1886	1961494	1961045	450	-	13	Phage phi 11 orf9 protein homolog	locus\|SAOUHSC_02078, protein_id\|YP_500571.1, gi\|88195762, geneID\|3919765
1887	1961760	1961536	225	-	41	Phage phi 11 orf8 protein homolog	locus\|SAOUHSC_02079, protein_id\|YP_500572.1, gi\|88195763, geneID\|3919766
1888	1962552	1961761	792	-	0	Phage antirepressor protein	locus\|SAOUHSC_02080, protein_id\|YP_500573.1, gi\|88195764, geneID\|3919767
1889	1963017	1962709	309	-	156	Phage protein	locus\|SAOUHSC_02081, protein_id\|YP_500574.1, gi\|88195765, geneID\|3919768
1890	1963250	1963032	219	-	14	Phage transcriptional regulator cro	locus\|SAOUHSC_02083, protein_id\|YP_500575.1, gi\|88195766, geneID\|3919769
1891	1963392	1964111	720	+	141	Phage repressor protein cI	locus\|SAOUHSC_02084, protein_id\|YP_500576.1, gi\|88195767, geneID\|3919770
1892	1964181	1964348	168	+	69	Phage protein	locus\|SAOUHSC_02085, protein_id\|YP_500577.1, gi\|88195768, geneID\|3919771

Annotation History / View All Related Annotations

Help on Annotations

Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

Protein Sequence

>fig|93061.5.peg.1880 Phage phi 11 orf12 protein homolog
MTEKTNQDVDILTQLGVKDISKQNANKFYKFAIYGKFGTGKTTFLTKDNNALVLDINEDG
TTVTEDGAVVQIKNYKHFSAVIKMLPKIIEQLRENGKQIDVVVIETIQKLRDITMDDIMD
GKSKKPTFNDWGECATRIVSIYRYISKLQEHYQFHLAISGHEGINKDKDDEGSTINPTIT
IEAQDQIKKAVISQSDVLARMTIEEHEQDGEKTYQYVLNAEPSNLFETKIRHSSNIKINN
KRFINPSINDVVQAIRNGN

MD5 = 7c32874b0af989d76cf8f7cf5dc67911

DNA Sequence

>fig|93061.5.peg.1880 Phage phi 11 orf12 protein homolog
atgactgaaaaaactaatcaagatgtcgatattttaacgcaactaggtgtaaaagacatc
agcaaacaaaatgcaaacaagttttataaatttgcgatatacggcaagttcggtactggt
aaaactacgtttttaacaaaagataacaatgccttagtactagatataaatgaggacgga
acaacggtaacagaagatggggcagttgtgcagattaagaattataagcattttagtgca
gtgattaaaatgctgcctaaaattattgaacaactaagagaaaacggaaaacaaattgat
gttgtagtgattgaaacaatccaaaagttacgtgatatcactatggacgacatcatggac
ggtaaatcaaagaaaccgacatttaatgattggggcgagtgtgctacacgcattgtaagt
atttatcgttatatttctaaattacaagaacattatcaatttcatcttgctataagcgga
cacgagggcattaacaaagacaaagatgatgagggaagtactatcaatccaacaatcacg
atagaggcacaagaccaaataaaaaaagcagtcatcagtcaatctgacgtgttagcaaga
atgacaatagaagaacatgagcaagacggcgaaaaaacttatcaatatgtacttaacgct
gaaccatcaaatttattcgagacaaagataagacactcaagcaacatcaaaattaacaac
aaacgtttcattaatccaagtattaacgatgttgtacaagcaattagaaatggtaattaa

DNA with Flanking Sequence

>fig|93061.5.peg.1880 Phage phi 11 orf12 protein homolog
aacaagacgaccgattcaaagtaactgatctagacagtgctaactgggtttttaagaaac
tggatgcaatcacaactaaagagaatgaaatcaacgatttagcaaataaagaaattgaac
gcataaacgaatggaaagataaagaagtagaaaaattacagagtggcaaagaatatttac
aaagccttgtaattgaatattacagaatacaaaaagaacaagatagcaaattcaagttga
atacaccttacggaaaagtgacagccagaaaaggttcaaaagtcattcaagttagcaatg
agcaagaagtcattaaacaacttgagcaacgaggttttgacaactatgtaaaagtaacta
aaaaacttagccaatcagacattaagaaagatttcaatgtaactgaaaacggcacattga
ttgacgcaaacggcgaagttttagagggtgctagcattgtggagaaaccaacgtcataca
cggtaaaggtgggagaatagatgactgaaaaaactaatcaagatgtcgatattttaacgc
aactaggtgtaaaagacatcagcaaacaaaatgcaaacaagttttataaatttgcgatat
acggcaagttcggtactggtaaaactacgtttttaacaaaagataacaatgccttagtac
tagatataaatgaggacggaacaacggtaacagaagatggggcagttgtgcagattaaga
attataagcattttagtgcagtgattaaaatgctgcctaaaattattgaacaactaagag
aaaacggaaaacaaattgatgttgtagtgattgaaacaatccaaaagttacgtgatatca
ctatggacgacatcatggacggtaaatcaaagaaaccgacatttaatgattggggcgagt
gtgctacacgcattgtaagtatttatcgttatatttctaaattacaagaacattatcaat
ttcatcttgctataagcggacacgagggcattaacaaagacaaagatgatgagggaagta
ctatcaatccaacaatcacgatagaggcacaagaccaaataaaaaaagcagtcatcagtc
aatctgacgtgttagcaagaatgacaatagaagaacatgagcaagacggcgaaaaaactt
atcaatatgtacttaacgctgaaccatcaaatttattcgagacaaagataagacactcaa
gcaacatcaaaattaacaacaaacgtttcattaatccaagtattaacgatgttgtacaag
caattagaaatggtaattaaaaattaattaaaaggacggtataaaaattatgaaaatcac
tggtagaacacaatacattcaagaaactaatcaagaggcattcatgaaaggtggggactt
tttaggagctggagaatttacagtaaaagttgcaaatgtcgagtttaacgacagagaaaa
cagatacttcacgattgtttttgaaaacaacgaaggtaaacaatacaaacacaaccaatt
cgtcccaccattccaacaagattatcaagaaaaacaatatatcgagttacttagtagatt
aggaattaaattgaacttaccagatttaacttttgacacagatcaattaattaacaaaat
cggaactattgtacttaaaaataaatttaacgaggaacaaggcaagtattttgtaagact
ctcatatgtaaaagtttggaataaagacgatgaagtagttaataaaccagaacctaaaac
tgatgagatgaaacaaaaagaacagcaagcaaatgggaaa

Assignments for Essentially Identical Proteins


Id	Organism	Who	Assignment
cmr\|NT05SA1875	Staphylococcus aureus NCTC 8325		conserved hypothetical protein
fig\|12360.1.peg.12	Staphylococcus aureus phage phi 11	FIG	Phage phi 11 orf12 protein homolog
fig\|320847.3.peg.30	Bacteriophage 52A	FIG	Phage phi 11 orf12 protein homolog
fig\|405947.2.peg.13	Siphoviridae Staphylococcus phage 80	FIG	Phage phi 11 orf12 protein homolog
fig\|680649.3.peg.2344	Staphylococcus aureus subsp. aureus MR1	FIG	Phage phi 11 orf12 protein homolog
fig\|93061.3.peg.1957	Staphylococcus aureus subsp. aureus NCTC 8325	FIG	Phage phi 11 orf12 protein homolog
gb\|AAL82240.1	Staphylococcus aureus phage phi 11		phi ETA orf 17-like protein
gb\|AAX91810.1	Bacteriophage 52A		ORF016
gb\|ABD31124.1	Staphylococcus aureus subsp. aureus NCTC 8325		conserved hypothetical phage protein
gb\|ABJ88861.1	Staphylococcus phage 80		conserved hypothetical protein
gi\|116235526	Staphylococcus phage 80	NCBI	conserved hypothetical protein
gi\|18920499	Staphylococcus aureus phage phi 11	NCBI	phi ETA orf 17-like protein
gi\|29028575	Staphylococcus phage 11	NCBI	phi ETA orf 17-like protein
gi\|62636699	Bacteriophage 52A	NCBI	ORF016
gi\|66396283	Staphylococcus phage 52A	NCBI	ORF016
gi\|87203314	Staphylococcus aureus subsp. aureus NCTC 8325	NCBI	conserved hypothetical phage protein
gi\|88195756	Staphylococcus aureus subsp. aureus NCTC 8325	NCBI	hypothetical protein SAOUHSC_02072
img\|637894699	Staphylococcus aureus aureus NCTC 8325	IMG	hypothetical protein
img\|638297007	Staphylococcus phage 11	IMG	phi ETA orf 17-like protein
img\|638315070	Bacteriophage 52A	IMG	ORF016
kegg\|sao:SAOUHSC_02072	Staphylococcus aureus subsp. aureus NCTC 8325	KEGG	hypothetical protein
ref\|NP_803265.1	Staphylococcus phage 11	RefSeq	phi ETA orf 17-like protein
ref\|YP_240651.1	Staphylococcus phage 52A	RefSeq	ORF016
ref\|YP_500565.1	Staphylococcus aureus subsp. aureus NCTC 8325	RefSeq	hypothetical protein SAOUHSC_02072
tr\|A7YGQ5	Staphylococcus phage 80	TrEMBL	Putative uncharacterized protein
tr\|Q2FX33	Staphylococcus aureus (strain NCTC 8325)	TrEMBL	Conserved hypothetical phage protein
tr\|Q4ZAS5	Staphylococcus phage 52A	TrEMBL	ORF016
tr\|Q8SDW5	Staphylococcus phage phi11 (Bacteriophage phi-11)	TrEMBL	Phi ETA orf 17-like protein

Links to Related Entries in Other Sites

This PEG has no links.
add a new link

Functional Coupling


Score	Peg	Function

Attributes

Help on Attributes


Key Link Explains Key	Value

Protein Families

No protein families found

Compare Regions

Compared Regions in SeedViewer

Similarities

Help with SEED similarities options

> Show tool descriptions

FIG search