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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|93061.5.peg.1878: Staphylococcus aureus subsp. aureus NCTC 8325

This feature in The SEED Viewer

NCBI Taxonomy Id: 93061

Current Assignment: Phage phi 11 orf14 protein homolog
Translate Function Assignments


Context on contig NC_007795 from base 1952084 to 1963250 (11167 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
1865 1952593 1952084 510 -           Phage deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23) locus|SAOUHSC_02057, protein_id|YP_500550.1, gi|88195741, geneID|3919744
1866 1952828 1952586 243 - -8         Phage protein locus|SAOUHSC_02058, protein_id|YP_500551.1, gi|88195742, geneID|3919745
1867 1953073 1952825 249 - -4         hypothetical protein locus|SAOUHSC_02059, protein_id|YP_500552.1, gi|88195743, geneID|3919746
1868 1953333 1953085 249 - 11         Phage phi 11 orf22 protein homolog locus|SAOUHSC_02060, protein_id|YP_500553.1, gi|88195744, geneID|3919747
1869 1953693 1953334 360 - 0         Phage phi 11 orf21 protein homolog locus|SAOUHSC_02061, protein_id|YP_500554.1, gi|88195745, geneID|3919748
1870 1953963 1953694 270 - 0         Phage transcriptional regulator cro locus|SAOUHSC_02062, protein_id|YP_500555.1, gi|88195746, geneID|3919749
1871 1954149 1953964 186 - 0         Phage phi 11 orf19 protein homolog locus|SAOUHSC_02063, protein_id|YP_500556.1, gi|88195747, geneID|3919750
1872 1954558 1954154 405 - 4         Phage phi 11 orf18 protein homolog locus|SAOUHSC_02064, protein_id|YP_500557.1, gi|88195748, geneID|3919751
1873 1954790 1954569 222 - 10         Phage phi 11 orf17 protein homolog locus|SAOUHSC_02065, protein_id|YP_500558.1, gi|88195749, geneID|3919752
1874 1954973 1954794 180 - 3         Phage protein locus|SAOUHSC_02066, protein_id|YP_500559.1, gi|88195750, geneID|3919753
1875 1956247 1955006 1242 - 32         Phage DNA helicase (EC 3.6.4.12) locus|SAOUHSC_02067, protein_id|YP_500560.1, gi|88195751, geneID|3919754
1876 1956600 1956244 357 - -4         Hypothetical protein, SAB1742c homolog [SA bacteriophages 11, Mu50B] locus|SAOUHSC_02068, protein_id|YP_500561.1, gi|88195752, geneID|3919755
1877 1957406 1956600 807 - -1         Phage replication initiation protein locus|SAOUHSC_02069, protein_id|YP_500562.1, gi|88195753, geneID|3919756
1878 1958070 1957378 693 - -29         Phage phi 11 orf14 protein homolog locus|SAOUHSC_02070, protein_id|YP_500563.1, gi|88195754, geneID|3919757
1879 1958637 1958083 555 - 12         Phage ssDNA binding protein locus|SAOUHSC_02071, protein_id|YP_500564.1, gi|88195755, geneID|3919758
1880 1959446 1958667 780 - 29         Phage phi 11 orf12 protein homolog locus|SAOUHSC_02072, protein_id|YP_500565.1, gi|88195756, geneID|3919759
1881 1959983 1959447 537 - 0         Phage phi 11 orf61 protein homolog locus|SAOUHSC_02073, protein_id|YP_500566.1, gi|88195757, geneID|3919760
1882 1960256 1959996 261 - 12         Phage phi 11 orf11 protein homolog locus|SAOUHSC_02074, protein_id|YP_500567.1, gi|88195758, geneID|3919761
1883 1960566 1960237 330 - -20         Phage protein locus|SAOUHSC_02075, protein_id|YP_500568.1, gi|88195759, geneID|3919762
1884 1960817 1960656 162 - 89         Phage phi 11 orf10a protein homolog locus|SAOUHSC_02076, protein_id|YP_500569.1, gi|88195760, geneID|3919763
1885 1961031 1960810 222 - -8         Phage phi 11 orf10 protein homolog locus|SAOUHSC_02077, protein_id|YP_500570.1, gi|88195761, geneID|3919764
1886 1961494 1961045 450 - 13         Phage phi 11 orf9 protein homolog locus|SAOUHSC_02078, protein_id|YP_500571.1, gi|88195762, geneID|3919765
1887 1961760 1961536 225 - 41         Phage phi 11 orf8 protein homolog locus|SAOUHSC_02079, protein_id|YP_500572.1, gi|88195763, geneID|3919766
1888 1962552 1961761 792 - 0         Phage antirepressor protein locus|SAOUHSC_02080, protein_id|YP_500573.1, gi|88195764, geneID|3919767
1889 1963017 1962709 309 - 156         Phage protein locus|SAOUHSC_02081, protein_id|YP_500574.1, gi|88195765, geneID|3919768
1890 1963250 1963032 219 - 14         Phage transcriptional regulator cro locus|SAOUHSC_02083, protein_id|YP_500575.1, gi|88195766, geneID|3919769

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|93061.5.peg.1878 Phage phi 11 orf14 protein homolog
MQYITRYQKDNDGTYSVVATGVELEQSHIDLLENGYPLKAEVEVPDNKKLSIEQRKKIFA
MCRDIELHWGEPVESTRKLLQTELEIMKGYEEISLRDCSMKVARELIELIIAFMFHHQIP
MSVETSKLLSEDKALLYWATINRNCVICGKPHADLAHYEAVGRGMNRNKMNHYDKHVLAL
CRQHHNEQHAIGVKSFDDKYHLHDSWIKVDERLNKMLKGENNGRSIVDKT

MD5 = 4c91b4261667be7341b9177c2f60f375


  DNA Sequence

>fig|93061.5.peg.1878 Phage phi 11 orf14 protein homolog
atgcaatacattacaagataccagaaagacaatgacggtacttattccgtcgttgctact
ggtgttgaacttgaacaaagtcacattgacttactagaaaacggatatccactaaaagca
gaagtagaggttccggacaataaaaaactatctatagaacaacgcaaaaaaatattcgca
atgtgtagagatatagaacttcactggggcgaaccagtagaatcaactagaaaattatta
caaacagaattggaaattatgaaaggttatgaagaaatcagtctgcgcgactgttctatg
aaagttgcaagggagttaatagaactgattatagcgtttatgtttcatcatcaaatacct
atgagtgtagaaacgagtaagttgttaagcgaagataaagcgttattatattgggctaca
atcaaccgcaactgtgtaatatgcggaaagcctcacgcagacctggcacattatgaagca
gtcggcagaggcatgaacagaaacaaaatgaatcactacgacaaacatgtgttagcactg
tgtagacaacatcataatgaacagcacgcaattggcgttaagtcgtttgatgataaatat
cacttgcatgactcgtggataaaagttgatgagaggctcaacaaaatgctgaaaggagaa
aacaatgggagaagtatcgtggataaaacttaa


  DNA with Flanking Sequence

>fig|93061.5.peg.1878 Phage phi 11 orf14 protein homolog
actttttaggagctggagaatttacagtaaaagttgcaaatgtcgagtttaacgacagag
aaaacagatacttcacgattgtttttgaaaacaacgaaggtaaacaatacaaacacaacc
aattcgtcccaccattccaacaagattatcaagaaaaacaatatatcgagttacttagta
gattaggaattaaattgaacttaccagatttaacttttgacacagatcaattaattaaca
aaatcggaactattgtacttaaaaataaatttaacgaggaacaaggcaagtattttgtaa
gactctcatatgtaaaagtttggaataaagacgatgaagtagttaataaaccagaaccta
aaactgatgagatgaaacaaaaagaacagcaagcaaatgggaaacagacgccaatgagtc
aacaatcaaacccattcgctaatgctaatggtccaatagaaatcaatgatgatgatttac
cgttctaggacgtggtttaaatgcaatacattacaagataccagaaagacaatgacggta
cttattccgtcgttgctactggtgttgaacttgaacaaagtcacattgacttactagaaa
acggatatccactaaaagcagaagtagaggttccggacaataaaaaactatctatagaac
aacgcaaaaaaatattcgcaatgtgtagagatatagaacttcactggggcgaaccagtag
aatcaactagaaaattattacaaacagaattggaaattatgaaaggttatgaagaaatca
gtctgcgcgactgttctatgaaagttgcaagggagttaatagaactgattatagcgttta
tgtttcatcatcaaatacctatgagtgtagaaacgagtaagttgttaagcgaagataaag
cgttattatattgggctacaatcaaccgcaactgtgtaatatgcggaaagcctcacgcag
acctggcacattatgaagcagtcggcagaggcatgaacagaaacaaaatgaatcactacg
acaaacatgtgttagcactgtgtagacaacatcataatgaacagcacgcaattggcgtta
agtcgtttgatgataaatatcacttgcatgactcgtggataaaagttgatgagaggctca
acaaaatgctgaaaggagaaaacaatgggagaagtatcgtggataaaacttaaagttggc
atgtttgatgacagcaaaatcaaatatatcgaagctttacccgaaagagatacgatcata
actatttgggttaagttactaactttatcaggaaagtacaatgaacaaggttatattatg
ctatccgaaaacttgccgtacaacgaagaaatgttagcaaatgaatttaatagacctatt
aactcaataaggttagcaattcaaacttttgagacattgggcatgattgaaaaagttaat
ggtgtcataaaagtgacaaactgggagaagcatcaaagcttagatagcaaagctaagcat
aaagaaaaaaataaattgcgacaacaacgctatcgtgagaaacagaaaaagttactagaa
gcaaaacgtaacgttaccgtaacgttacgtaacgatacagaagaagaagaagaaagagaa
gaagaaaaagaagaagaatataagaataaagaagaagaaagagaagccgtcttctcatct
tcaataaaatata


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
cmr|NT05SA1873 Staphylococcus aureus NCTC 8325     77ORF018
fig|12360.1.peg.14 Staphylococcus aureus phage phi 11 FIG   Phage phi 11 orf14 protein homolog
fig|93061.3.peg.1955 Staphylococcus aureus subsp. aureus NCTC 8325 FIG   Phage phi 11 orf14 protein homolog
gb|AAL82242.1 Staphylococcus aureus phage phi 11     phi PV83 orf 19-like protein
gb|ABD31122.1 Staphylococcus aureus subsp. aureus NCTC 8325     phi PV83 orf 19-like protein
gi|18920501 Staphylococcus aureus phage phi 11 NCBI   phi PV83 orf 19-like protein
gi|29028577 Staphylococcus phage 11 NCBI   phi PV83 orf 19-like protein
gi|87203312 Staphylococcus aureus subsp. aureus NCTC 8325 NCBI   phi PV83 orf 19-like protein
gi|88195754 Staphylococcus aureus subsp. aureus NCTC 8325 NCBI   phi PV83 orf 19-like protein
img|637894697 Staphylococcus aureus aureus NCTC 8325 IMG   phi PV83 orf 19-like protein
img|638297009 Staphylococcus phage 11 IMG   phi PV83 orf 19-like protein
kegg|sao:SAOUHSC_02070 Staphylococcus aureus subsp. aureus NCTC 8325 KEGG   phi PV83 orf 19-like protein
ref|NP_803267.1 Staphylococcus phage 11 RefSeq   phi PV83 orf 19-like protein
ref|YP_500563.1 Staphylococcus aureus subsp. aureus NCTC 8325 RefSeq   phi PV83 orf 19-like protein
tr|Q2FUP5 Staphylococcus aureus (strain NCTC 8325) TrEMBL   Phi PV83 orf 19-like protein
tr|Q8SDW3 Staphylococcus phage phi11 (Bacteriophage phi-11) TrEMBL   Phi PV83 orf 19-like protein


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  Functional Coupling

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  Attributes

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  Protein Families

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