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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
The SEED


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Protein fig|93061.5.peg.1863: Staphylococcus aureus subsp. aureus NCTC 8325

This feature in The SEED Viewer

NCBI Taxonomy Id: 93061

Current Assignment: Phage phi 11 orf26a protein homolog
Translate Function Assignments



Context on contig NC_007795 from base 1946234 to 1957406 (11173 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
1855 1947229 1946234 996 -           Phage minor head protein locus|SAOUHSC_02047, protein_id|YP_500540.1, gi|88195731, geneID|3920497
1856 1948771 1947236 1536 - 6         Phage portal locus|SAOUHSC_02048, protein_id|YP_500541.1, gi|88195732, geneID|3920498
1857 1950059 1948782 1278 - 10         Phage terminase, large subunit locus|SAOUHSC_02049, protein_id|YP_500542.1, gi|88195733, geneID|3920499
1858 1950486 1950046 441 - -14         Phage terminase, small subunit locus|SAOUHSC_02050, protein_id|YP_500543.1, gi|88195734, geneID|3920500
1859 1951095 1950673 423 - 186         Phage integrase regulator RinA locus|SAOUHSC_02051, protein_id|YP_500544.1, gi|88195735, geneID|3920501
1860 1951265 1951119 147 - 23         Phage protein ORF120 locus|SAOUHSC_02052, protein_id|YP_500545.1, gi|88195736, geneID|3920502
1861 1951439 1951266 174 - 0         Transcriptional activator rinB, phage associated locus|SAOUHSC_02053, protein_id|YP_500546.1, gi|88195737, geneID|3919740
1862 1951642 1951442 201 - 2         hypothetical protein locus|SAOUHSC_02054, protein_id|YP_500547.1, gi|88195738, geneID|3919741
1863 1951805 1951617 189 - -26         Phage phi 11 orf26a protein homolog locus|SAOUHSC_02055, protein_id|YP_500548.1, gi|88195739, geneID|3919742
1864 1952047 1951802 246 - -4         Hypothetical protein, SLT orf81b homolog [SA bacteriophages 11, Mu50B] locus|SAOUHSC_02056, protein_id|YP_500549.1, gi|88195740, geneID|3919743
1865 1952593 1952084 510 - 36         Phage deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23) locus|SAOUHSC_02057, protein_id|YP_500550.1, gi|88195741, geneID|3919744
1866 1952828 1952586 243 - -8         Phage protein locus|SAOUHSC_02058, protein_id|YP_500551.1, gi|88195742, geneID|3919745
1867 1953073 1952825 249 - -4         hypothetical protein locus|SAOUHSC_02059, protein_id|YP_500552.1, gi|88195743, geneID|3919746
1868 1953333 1953085 249 - 11         Phage phi 11 orf22 protein homolog locus|SAOUHSC_02060, protein_id|YP_500553.1, gi|88195744, geneID|3919747
1869 1953693 1953334 360 - 0         Phage phi 11 orf21 protein homolog locus|SAOUHSC_02061, protein_id|YP_500554.1, gi|88195745, geneID|3919748
1870 1953963 1953694 270 - 0         Phage transcriptional regulator cro locus|SAOUHSC_02062, protein_id|YP_500555.1, gi|88195746, geneID|3919749
1871 1954149 1953964 186 - 0         Phage phi 11 orf19 protein homolog locus|SAOUHSC_02063, protein_id|YP_500556.1, gi|88195747, geneID|3919750
1872 1954558 1954154 405 - 4         Phage phi 11 orf18 protein homolog locus|SAOUHSC_02064, protein_id|YP_500557.1, gi|88195748, geneID|3919751
1873 1954790 1954569 222 - 10         Phage phi 11 orf17 protein homolog locus|SAOUHSC_02065, protein_id|YP_500558.1, gi|88195749, geneID|3919752
1874 1954973 1954794 180 - 3         Phage protein locus|SAOUHSC_02066, protein_id|YP_500559.1, gi|88195750, geneID|3919753
1875 1956247 1955006 1242 - 32         Phage DNA helicase (EC 3.6.4.12) locus|SAOUHSC_02067, protein_id|YP_500560.1, gi|88195751, geneID|3919754
1876 1956600 1956244 357 - -4         Hypothetical protein, SAB1742c homolog [SA bacteriophages 11, Mu50B] locus|SAOUHSC_02068, protein_id|YP_500561.1, gi|88195752, geneID|3919755
1877 1957406 1956600 807 - -1         Phage replication initiation protein locus|SAOUHSC_02069, protein_id|YP_500562.1, gi|88195753, geneID|3919756

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|93061.5.peg.1863 Phage phi 11 orf26a protein homolog
MTQYLVTTFKDSTGQPHEHFTTARDNQTFTVVEAESKEEAERKYEAQVKIRRDGDAKENG
ND

MD5 = 8e76d44a66d507bd4bd5d398c12700bc


  DNA Sequence

>fig|93061.5.peg.1863 Phage phi 11 orf26a protein homolog
gtgacgcaatacttagtcacaacattcaaagattcaacaggacaaccacatgaacatttt
actactgctagagataatcagacgtttacagttgttgaggcagagagtaaagaagaagct
gagcgcaaatacgaggcacaagttaagataaggagagatggagatgccaaagaaaacggt
aacgattga


  DNA with Flanking Sequence

>fig|93061.5.peg.1863 Phage phi 11 orf26a protein homolog
attgcatcgaatggttatatcacaccaggtgtttttgatattaaaggagaaatcgatttg
agtgacgccataagacaatacggaacttatcaaatcaacgaaggagacaaactagctcaa
ttggttatcgtgcctatatggacacctgaactaaagcaagtggaggaattcgaaagtgtt
tcagaacgtggagaaaaaggcttcggaagtagcggagtgtaaagacatcttagatcgagt
caaggaggttttggggaagtgagttacatcattacattagttccaatacttgtattcata
gtaatatttaacaatttacttaacagatatatggttttgtacaaagaattagatttattt
acatgcagaattggaatgttattagtcttaatcgttatagtagattttgcaaagcaaaaa
aatatgttggctacattgagtgttgtactaatacttttattcgtagaaaaacttagaatc
attcaaaggagtgataagaagtgacgcaatacttagtcacaacattcaaagattcaacag
gacaaccacatgaacattttactactgctagagataatcagacgtttacagttgttgagg
cagagagtaaagaagaagctgagcgcaaatacgaggcacaagttaagataaggagagatg
gagatgccaaagaaaacggtaacgattgatgtagatgaaaacttattagtagtagctagt
aatgaaatatcagaactattatatgaatatgacagtgagttaatgtcagctgatgaagat
ggcgataatagagatatcaaagaaaaaagagacgcattaaaacaagctatacaaattatc
gataaattaacatggggtgtttagtggtggttaaagaaattttgagactattattcttac
tagcgatgtatgagttaggtaagtatgtaactgagcaagtatatattatgatgacggcta
atgatgatgtagaggcgccaagtgacttcgcaaagttgagtgatcagtctgatttgatga
gggcggaggtgtcggagtagatgatgtggttaatcatagcaattatattactagtcatct
tattgtttggtgtgatgttacaagcggaacagttaaaaggtgatgtaaaagttaaagagc
gagagatagagatattaagaagtagattgagacactttgaagattaaac


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
cmr|NT05SA1858 Staphylococcus aureus NCTC 8325     conserved domain protein
dbj|BAA31928.1 Staphylococcus phage PVL     unnamed protein product
dbj|BAF43851.1 Staphylococcus phage phiETA2     hypothetical protein
fig|326036.2.peg.36 Siphoviridae Staphylococcus phage phiETA2 FIG   Phage phi 11 orf26a protein homolog
fig|585147.3.peg.1515 Staphylococcus aureus subsp. aureus A017934/97 FIG   Phage phi 11 orf26a protein homolog
fig|585161.3.peg.1818 Staphylococcus aureus subsp. aureus WW2703/97 FIG   Phage phi 11 orf26a protein homolog
fig|71366.1.peg.54 Staphylococcus aureus bacteriophage PVL FIG   Phage phi 11 orf26a protein homolog
fig|93061.3.peg.1940 Staphylococcus aureus subsp. aureus NCTC 8325 FIG   Phage phi 11 orf26a protein homolog
gb|ABD31107.1 Staphylococcus aureus subsp. aureus NCTC 8325     conserved hypothetical phage protein
gi|121309229 Staphylococcus phage phiETA2 NCBI   hypothetical protein
gi|122891750 Staphylococcus phage phiETA2 NCBI   hypothetical protein phiETA2_gp36
gi|3341962 Staphylococcus phage PVL NCBI   unnamed protein product
gi|87203297 Staphylococcus aureus subsp. aureus NCTC 8325 NCBI   conserved hypothetical phage protein
gi|88195739 Staphylococcus aureus subsp. aureus NCTC 8325 NCBI   hypothetical protein SAOUHSC_02055
gi|9635219 Staphylococcus phage PVL NCBI   hypothetical protein PVL_54
img|637894682 Staphylococcus aureus aureus NCTC 8325 IMG   hypothetical protein
img|638284573 Staphylococcus aureus bacteriophage PVL IMG   hypothetical protein
img|641206418 Staphylococcus phage phiETA2 IMG   hypothetical protein
kegg|sao:SAOUHSC_02055 Staphylococcus aureus subsp. aureus NCTC 8325 KEGG   hypothetical protein
ref|NP_058493.1 Staphylococcus phage PVL RefSeq   hypothetical protein PVL_54
ref|YP_001004296.1 Staphylococcus phage phiETA2 RefSeq   hypothetical protein phiETA2_gp36
ref|YP_500548.1 Staphylococcus aureus subsp. aureus NCTC 8325 RefSeq   hypothetical protein SAOUHSC_02055
tr|A1KX18 Staphylococcus phage phiETA2 TrEMBL   Putative uncharacterized protein
tr|O80093 Staphylococcus phage PVL TrEMBL   Orf 55
tr|Q2FX45 Staphylococcus aureus (strain NCTC 8325) TrEMBL   Conserved hypothetical phage protein


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  Attributes

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  Protein Families

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