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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|904139.4.peg.1330: Salmonella enterica subsp. enterica serovar Choleraesuis str. A50

This feature in The SEED Viewer

NCBI Taxonomy Id: 904139

Current Assignment: Putative bacteriophage protein
Translate Function Assignments



Context on contig AEJH01000003 from base 379668 to 392693 (13026 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
1325 381467 379668 1800 -       2: 1 2   Translation elongation factor LepA  
1326 381896 383362 1467 + 428         leucine-rich repeat protein  
1327 383613 383765 153 + 250         FIG01049441: hypothetical protein  
1328 384596 384180 417 - 414         Putative phage tail fibre protein  
1329 386015 384603 1413 - 6         Phage tail fibers  
1330 386695 386015 681 - -1       Putative bacteriophage protein  
1331 387891 386692 1200 - -4         putative bacteriophage protein  
1332 388245 387892 354 - 0         putative bacteriophage protein  
1333 389151 388381 771 - 135 4     Phage-related protein  
1334 389985 389200 786 - 48         KilA protein  
1335 390697 390050 648 - 64         Phage Rha protein  
1336 390845 390687 159 - -11         FIG01048844: hypothetical protein  
1337 391117 391323 207 + 271         putative regulatory protein  
1338 391470 391330 141 - 6         Putative exported protein  
1339 392693 391662 1032 - 191         putative bacteriophage protein  

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|904139.4.peg.1330 Putative bacteriophage protein
MSKYTDLITNYHATKPKFFEHIDLVTRPLAETSAAINGLINAFDIDHATGIQLDILGQWI
GLSRIVSQPISGVYFSWDTDGLGYDQGVWQGPYDPDSGYTSVSDETYRIVLKTKIAINNW
DGRNDSLPPILDAALDGAGLKMQIVDNQDMTIGIWVFPETDISSVSLELIAAIRQGYLTV
KAAGVWGGSIEIPSVETPSEGNRFFGFDMDNEYISGFDAGSWGTLL

MD5 = 9ce2e28bef0aa25a09d6ccf553c0bfe8


  DNA Sequence

>fig|904139.4.peg.1330 Putative bacteriophage protein
atgagcaaatatacggacttaattactaactatcatgcgacaaaacctaaattctttgaa
cacatcgatttagtgaccaggccgttagctgaaacctcagccgcaataaatgggctaata
aacgcttttgatattgatcatgcgacaggaatacaactcgatattctcggccaatggata
gggttaagccggattgtaagccagccaataagcggtgtctatttcagctgggacactgac
ggactcggatatgaccagggcgtctggcaggggccatatgatccggattcgggttatacc
tcggtgagcgatgaaacctatcgcatcgttctaaaaacgaagatagcaattaacaactgg
gacggaagaaacgactctctgcctcccattcttgacgctgcactggacggggccggtctg
aagatgcagatcgtcgataaccaggacatgaccataggtatctgggtttttcctgaaaca
gatatttcatcggtctctctcgaacttattgctgcgatacgacaagggtatctgacggta
aaggccgctggtgtatggggcggaagtattgaaattccttcggtggaaacgccttctgaa
ggaaacaggttttttgggtttgatatggataacgaatatatcagcgggtttgatgccggt
tcatgggggacattactctga


  DNA with Flanking Sequence

>fig|904139.4.peg.1330 Putative bacteriophage protein
acaggaaagactgacggtaacgggcttcctccgcattccatctcggccattgttgatggt
ggcgatgttaccgaaatagccaggaccatccggggaaataaagggcagggggtccggacc
tggggaaaaacatccgtaaccgtaccggataaatatggcaatcctcacataatcagtttt
tcgcgaccaactgatgtccctgtttacggaaaaatcaccttaaaagtttttgccgggtac
acctctcagataggtgtgcagattcagcaggctgttgcggattacattaacagactgatg
attggtgatcaggtactgctgagccggatttattctcctgctaaccttggggtcgtcagt
ggtggaaatgcgcgctattacgatattcaggagctactgatcggcaaatctccggaagct
gttgctgcggcgaatattaatattgcttacgacgaatctgcctcctgtaagccggaaaat
attattattacggtggcagcatgagcaaatatacggacttaattactaactatcatgcga
caaaacctaaattctttgaacacatcgatttagtgaccaggccgttagctgaaacctcag
ccgcaataaatgggctaataaacgcttttgatattgatcatgcgacaggaatacaactcg
atattctcggccaatggatagggttaagccggattgtaagccagccaataagcggtgtct
atttcagctgggacactgacggactcggatatgaccagggcgtctggcaggggccatatg
atccggattcgggttatacctcggtgagcgatgaaacctatcgcatcgttctaaaaacga
agatagcaattaacaactgggacggaagaaacgactctctgcctcccattcttgacgctg
cactggacggggccggtctgaagatgcagatcgtcgataaccaggacatgaccataggta
tctgggtttttcctgaaacagatatttcatcggtctctctcgaacttattgctgcgatac
gacaagggtatctgacggtaaaggccgctggtgtatggggcggaagtattgaaattcctt
cggtggaaacgccttctgaaggaaacaggttttttgggtttgatatggataacgaatata
tcagcgggtttgatgccggttcatgggggacattactctgatggctaaaaatgattttaa
accgtttgcgacgggcaagggtgctaatgttacatcgcagcctgactgggaggcgctgcc
ggcgctcctgtctggttttactgcgggcaaggcatcaagtgcacaggtaaataaagcgct
gcgtcaggcaagcttcatcgctgcaacactggcacagtacacagccagcaagagcgggca
ggatgtactcgatgatggtgacctgagcggctttatcgccaaaatgtccgctgcgttcgg
taaggattttcagactcttgatgccacgctgacggcgctcgctggtcttgctaccggtgc
agataaactcccgtattttacgggtaatgataccgccggacagacagatcttacttctgt
tgggcgcgacatcatcggaaaagccagcattgcggatattctcacatacctcggtttggg
agaaacagcaaagcaagctgctggcgcagtccagaaaaccggcgatgagatgaacgggaa
g


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

This PEG has no links.
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  Functional Coupling

Score Peg Function
4 fig|904139.4.peg.1333 Phage-related protein


  Attributes

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  Protein Families

No protein families found

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