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SEED version cvs.1555556707 (3/17/2019 22:5:7) on aspen.cels.anl.gov
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Protein fig|869684.5.peg.5491: Escherichia coli 5.0959

This feature in The SEED Viewer

NCBI Taxonomy Id: 869684

Current Assignment: Integrase
Translate Function Assignments


Context on contig AEZX02000028 from base 436 to 5557 (5122 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
5491 436 744 309 +           Integrase locus|EC50959_3532, protein_id|EII07889.1, gi|386203364
5492 1222 1803 582 + 477         COG3617: Prophage antirepressor locus|EC50959_3534, protein_id|EII07903.1, gi|386203378
5493 2103 1924 180 - 120         conserved hypothetical protein locus|EC50959_3535, protein_id|EII07888.1, gi|386203363
5494 2336 2503 168 + 232         FIG00643952: hypothetical protein locus|EC50959_3536, protein_id|EII07898.1, gi|386203373
5495 2496 2720 225 + -8         FIG00638379: hypothetical protein locus|EC50959_3537, protein_id|EII07890.1, gi|386203365
5496 2713 3081 369 + -8         FIG00641729: hypothetical protein locus|EC50959_3538, protein_id|EII07896.1, gi|386203371
5497 3074 3307 234 + -8         FIG00641184: hypothetical protein locus|EC50959_3539, protein_id|EII07895.1, gi|386203370
5498 3300 3473 174 + -8         FIG00640024: hypothetical protein locus|EC50959_3540, protein_id|EII07894.1, gi|386203369
5499 3600 3746 147 + 126         FIG00638501: hypothetical protein locus|EC50959_3541, protein_id|EII07902.1, gi|386203377
5500 3743 5557 1815 + -4         DNA primase (EC 2.7.7.-), phage-associated locus|EC50959_3542, protein_id|EII07897.1, gi|386203372

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|869684.5.peg.5491 Integrase
MVRPGEAIKAEWSEIDFDSGLWIIPAHKMKCHREHVVPLSSQAISILRTMQEIKRGRYVF
FSSRTKDAPMGRNTIKTPIAASKFKGIVTLHGFRSMWSTLLK

MD5 = d91336766820831f5f68b54bca483da0


  DNA Sequence

>fig|869684.5.peg.5491 Integrase
atggtcaggccaggtgaggcgattaaagcagagtggtcagagattgattttgattctggc
ttgtggattatccccgcgcataaaatgaaatgccatcgtgaacatgttgttcccttgtca
tcacaggctattagtatcctcagaacaatgcaggaaataaaaagagggcgttatgtgttt
ttttcctccagaacaaaagatgcgcctatggggaggaatactatcaagaccccaattgct
gccagtaagttcaaagggattgtaacgttacatggttttcgttcaatgtggagtacgctt
ttaaaatga


  DNA with Flanking Sequence

>fig|869684.5.peg.5491 Integrase
ctaaaaaatctacagacatttgaagctgttgctaatgcatggttcgcttttaaaaaggga
tctgaattgcggaaacctacgctgtataatatcgaatatgaagtatacaaatatcttgtt
cctttctttggtaagtacagtatagaaaaaattacagcaccagtagctattaatgctctg
gatgccgtatccgataagaatgcgttgcaaaaaaaattaatatcaagattaaatgaaatt
atgaattatgctgtaaattgtggagcattgaaagcaaatccattacttaagataaagact
gcattcacaggaaagaaaaataaatcattagcagcactacctgttgaaagattgcctgaa
tttctgagctggtgggatagtgtgcctcatacctatcaaatagctcataatgcactttta
ttccagatattgacaatggtcaggccaggtgaggcgattaaagcagagtggtcagagatt
gattttgattctggcttgtggattatccccgcgcataaaatgaaatgccatcgtgaacat
gttgttcccttgtcatcacaggctattagtatcctcagaacaatgcaggaaataaaaaga
gggcgttatgtgtttttttcctccagaacaaaagatgcgcctatggggaggaatactatc
aagaccccaattgctgccagtaagttcaaagggattgtaacgttacatggttttcgttca
atgtggagtacgcttttaaaatgaggagggatttaaccccgatgtaatcgaggctgcatt
ggcgcataaaagtggtgataaaataagagatatttataatagaactatttatctagaaca
gcgtaagatcatgatgcaatgggtcggtgatttttttgatgatgcgagaaaaggggtaat
taatagatccggtggtatgaaaggtttaagagtagtaaatggttgaggaggttcagcaaa
tgaataccaatgaagatattttattactaaagacgtaatgaaaatcttgcgatatggagc
aatgagtgcattcatcaatttctggaaagatgagaataatggttttcctcagccgttcag
aattggacgacgacatacctggcaccgtagagatgtagaagcatggttagataaacaacg
agaacaggccaatccccactaataatatctttcataccccgcgtgcaatgcggggttttt
tgtatgtgaggtaaaaaagaaatgaataaaaatattgccgtgac


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