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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|682148.3.peg.1122: Gardnerella vaginalis 5-1

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NCBI Taxonomy Id: 682148

Current Assignment: Phage antirepressor protein
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Context on contig NZ_ADAN01000092 from base 143 to 10926 (10784 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
1117 143 622 480 +           hypothetical protein locus|GV51_1079, protein_id|ZP_06977380.1, gi|298253791
1118 915 1223 309 + 292         rRNA biogenesis protein rrp5, putative locus|GV51_1080, protein_id|ZP_06977381.1, gi|298253792
1119 1180 2346 1167 + -44         Phage protein locus|GV51_1081, protein_id|ZP_06977382.1, gi|298253793
1120 2351 2899 549 + 4         Phage protein locus|GV51_1082, protein_id|ZP_06977383.1, gi|298253794
1121 3126 5102 1977 + 226         FIG006036: phage encoded DNA polymerase I (EC 2.7.7.7) locus|GV51_1084, protein_id|ZP_06977385.1, gi|298253796
1122 5200 5991 792 + 97         Phage antirepressor protein locus|GV51_1085, protein_id|ZP_06977386.1, gi|298253797
1123 6242 6358 117 + 250         hypothetical protein locus|GV51_1086, protein_id|ZP_06977387.1, gi|298253798
1124 6351 8678 2328 + -8         DNA primase, phage associated locus|GV51_1087, protein_id|ZP_06977388.1, gi|298253799
1125 9095 9244 150 + 416         FIG00672347: hypothetical protein locus|GV51_1088, protein_id|ZP_06977389.1, gi|298253800
1126 9487 10926 1440 + 242         DNA helicase, phage-associated locus|GV51_1090, protein_id|ZP_06977391.1, gi|298253802

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|682148.3.peg.1122 Phage antirepressor protein
MNELQVFKNVELGSVRTTVVDGIPYFVGKDVAEILGYRDTSDALKRHVDEDDKLTRCFTD
SGQNREMYVINESGLYSLILRSQLPKACQFKRWVTSQVLPSIRKHGMYATDELINNPDMA
IAVFNALKEERAKREALELTTAVQKQQIAELKPKASYYDVVLKCKDIISMRVIAKDYGKS
AQWMNNFLHELGVQYRQSDIWLLYQKYANQEYTKSRTNTYEDSNGVTHSKMHTYWTQKGR
LFIYHLMTQHGIYPLIEQEAKDE

MD5 = 4940622f387168aa61c18ad55858a6ec


  DNA Sequence

>fig|682148.3.peg.1122 Phage antirepressor protein
atgaatgaattacaagtatttaagaatgtagagcttggctctgttcgcacaacagtagta
gatggtatcccatattttgtgggcaaggacgtggctgagattcttggttatcgtgataca
tctgatgcactgaaaaggcatgtagatgaagatgataagctgactcggtgtttcaccgac
tcaggtcagaaccgagaaatgtatgttattaacgagtctggtctttacagtcttattctt
agaagtcagctccctaaagcgtgtcagtttaaacgatgggttacatcacaggttcttccg
agtatccgtaagcacggtatgtatgcgacagatgagcttatcaacaatcctgatatggct
atcgctgtttttaacgcattgaaagaagagcgtgctaaaagagaagcgttagagcttacg
actgctgtgcaaaaacagcagatagctgagcttaaaccgaaagccagctattacgatgtt
gtgcttaaatgcaaagacataatctctatgcgtgtgattgcaaaagattatggcaagtca
gcacagtggatgaataactttttgcatgagctcggtgtgcagtataggcagtctgatatc
tggcttttatatcaaaagtatgccaatcaggaatatacgaaatctcgcacaaatacatac
gaggattctaatggtgttacacactcaaaaatgcatacttattggactcagaaaggcagg
cttttcatctatcacctcatgacacaacacggtatctacccgttgattgaacaggaggct
aaagatgagtaa


  DNA with Flanking Sequence

>fig|682148.3.peg.1122 Phage antirepressor protein
tatagtgttcacttacaagagtgggtttcttatcatcaaactgccttcgaaaagatgcct
ttactatgtgaagccacgtgtggaagaaaacaagtatggtggtgaatcggtcacatatga
gggtgtgggatctactaaaaaatgggagcggctggaaagctacggtcctaaattcgtaga
aaacattacgcaagctatagctcgtgacatcctcatctatgctatgcaaacgctgaaaga
atatcgcatcgtcgcgcacgtgcatgatgaagccattatcgaaaccgataaaagcgtgag
tgttcaaagcgtgtgtgagctaatgggaagaacaccaccttgggcagaaggtttacttct
tagagctgacggctacgagtgcgagttttacaaaaaagattaaaaaaattttaggagcag
ggttaaaaacctgctctttttctttgcctgtgatttagaaggtaataccgccttcagaaa
aaatcataggaggtaattttatgaatgaattacaagtatttaagaatgtagagcttggct
ctgttcgcacaacagtagtagatggtatcccatattttgtgggcaaggacgtggctgaga
ttcttggttatcgtgatacatctgatgcactgaaaaggcatgtagatgaagatgataagc
tgactcggtgtttcaccgactcaggtcagaaccgagaaatgtatgttattaacgagtctg
gtctttacagtcttattcttagaagtcagctccctaaagcgtgtcagtttaaacgatggg
ttacatcacaggttcttccgagtatccgtaagcacggtatgtatgcgacagatgagctta
tcaacaatcctgatatggctatcgctgtttttaacgcattgaaagaagagcgtgctaaaa
gagaagcgttagagcttacgactgctgtgcaaaaacagcagatagctgagcttaaaccga
aagccagctattacgatgttgtgcttaaatgcaaagacataatctctatgcgtgtgattg
caaaagattatggcaagtcagcacagtggatgaataactttttgcatgagctcggtgtgc
agtataggcagtctgatatctggcttttatatcaaaagtatgccaatcaggaatatacga
aatctcgcacaaatacatacgaggattctaatggtgttacacactcaaaaatgcatactt
attggactcagaaaggcaggcttttcatctatcacctcatgacacaacacggtatctacc
cgttgattgaacaggaggctaaagatgagtaagtcttataaaaagcatttagaaacaaca
ccgaattttaagcctatcgtctacatttgtgctccctaccgtggagataaggaaagaaac
gttaagcacgctattcggtgtgcggcttacgcgtattcacgcggagcaatccctatcact
ccacacctgcttttccctttcatggatgatgagaatcaaaagcatagaggggatgcgatg
tttatggacattatcctcttaggcaagtgcaacgaactatgggtgttcggagaaaaaatc
acaggcggcatgcaagtagaaatcaatttggctgaaaaacgcaggcagccgattaagtat
tttacggataaggatttgggggtgaatgttgatgcgtagtttagctatcgcttacggtaa
caacaggcaggcaaagacatgggtgaataagaccatcacctatggtgagctgaaagaccg
tcttaaagtgacgattcgcacctcagagtcagcggaagagtatgcaaaaatg


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

This PEG has no links.
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  Functional Coupling

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  Attributes

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  Protein Families

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