Protein Page for fig|682148.3.peg.1117

SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov

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Protein fig|682148.3.peg.1117: Gardnerella vaginalis 5-1

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NCBI Taxonomy Id: 682148

Current Assignment: hypothetical protein

Translate Function Assignments

Context on contig NZ_ADAN01000092 from base 143 to 5991 (5849 bp)


Fid	Start	End	Size (nt)		Gap	Function	Aliases
1117	143	622	480	+		hypothetical protein	locus\|GV51_1079, protein_id\|ZP_06977380.1, gi\|298253791
1118	915	1223	309	+	292	rRNA biogenesis protein rrp5, putative	locus\|GV51_1080, protein_id\|ZP_06977381.1, gi\|298253792
1119	1180	2346	1167	+	-44	Phage protein	locus\|GV51_1081, protein_id\|ZP_06977382.1, gi\|298253793
1120	2351	2899	549	+	4	Phage protein	locus\|GV51_1082, protein_id\|ZP_06977383.1, gi\|298253794
1121	3126	5102	1977	+	226	FIG006036: phage encoded DNA polymerase I (EC 2.7.7.7)	locus\|GV51_1084, protein_id\|ZP_06977385.1, gi\|298253796
1122	5200	5991	792	+	97	Phage antirepressor protein	locus\|GV51_1085, protein_id\|ZP_06977386.1, gi\|298253797

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Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

Protein Sequence

>fig|682148.3.peg.1117 hypothetical protein
MDDSEVYYNNKNLRPARTAEEKAEIEAWKEKYIKRFEERYGYKPNKDDVDYAANKHFLPN
YNSSIDFDADGELEVDKSHLAEALSTTDDYGFITNDYGFEWSEEMEHAFSTLTDKQRQVI
RLMFIEGYTQSEIASMLGISSAGVKKHLDKALEKLRKTR

MD5 = 88ef14850da3dcf332f81114ce4299b8

DNA Sequence

>fig|682148.3.peg.1117 hypothetical protein
atggatgacagcgaggtttactacaacaataagaatctgcgtcctgctagaactgctgaa
gaaaaagctgagattgaagcgtggaaagagaagtacatcaaacgtttcgaagaaagatac
ggctacaaacccaacaaagacgacgttgactacgctgctaacaagcatttcctacccaac
tataattcctcgattgactttgatgcagatggcgagcttgaagtagataaaagtcatctt
gctgaagctctcagtactactgatgattatggttttattaccaacgattatggttttgaa
tggtcagaagaaatggagcatgcgttttcaacgcttactgacaagcagcgtcaggttatt
cgtttgatgtttattgaaggatacactcagtcagagattgcaagcatgcttggtatctcg
tctgctggtgtgaaaaagcatctggataaggctctcgaaaagcttagaaaaacgcgttaa

DNA with Flanking Sequence

>fig|682148.3.peg.1117 hypothetical protein
caaaactaatagcaacgatcgagcaacatataagtatacaagttgtgttcgtaatgaaga
tggtagttatagtgaagaaactatcgagattaagccgggcgaaaatggtgtcactgaagc
ggatattaagatgcttcactcaatggatgacagcgaggtttactacaacaataagaatct
gcgtcctgctagaactgctgaagaaaaagctgagattgaagcgtggaaagagaagtacat
caaacgtttcgaagaaagatacggctacaaacccaacaaagacgacgttgactacgctgc
taacaagcatttcctacccaactataattcctcgattgactttgatgcagatggcgagct
tgaagtagataaaagtcatcttgctgaagctctcagtactactgatgattatggttttat
taccaacgattatggttttgaatggtcagaagaaatggagcatgcgttttcaacgcttac
tgacaagcagcgtcaggttattcgtttgatgtttattgaaggatacactcagtcagagat
tgcaagcatgcttggtatctcgtctgctggtgtgaaaaagcatctggataaggctctcga
aaagcttagaaaaacgcgttaaaaaattctagaaattttatttggaggaggttaaaaact
cctcctttttctttgcctgtgatgtgtaaggaagaaaccccttatagaaaggaggcaaaa
ctcgtgaaacacaagatcgttattaacgtcaccggtgaaaacggtgagaagaaacaggtt
ctacgtggagctgtgatgcgattacctcaacggtttatccgctggctgtttggtgattac
tcgcaagtctacctattagatcctggaaagagtgttcagtcagttgatgtcaaagaagtt
taaggaggaaaaccgtgaaaaaggaaatattgagagaagttatcaaagacttggaaaact
taacagctcatcttaaaacgctgtttgatgatgctggtgcttctggtgctggttgtaaag
aaacagctcctaataataaggggtctgttaaaaaggtgagtttggaggatgtgcgagcgg
ttttagcaaaacttagccagatgggaaagacagctgatgtga

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  Functional Coupling


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