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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|585396.4.peg.5909: Escherichia coli O111:H- str. 11128

This feature in The SEED Viewer

NCBI Taxonomy Id: 585396

Current Assignment: putative antirepressor protein
Translate Function Assignments


Context on contig NC_013370 from base 90170 to 97179 (7010 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
5904 90170 90544 375 +           Late promoter-activating protein (Gp10) locus|ECO111_p2-115, protein_id|YP_003238017.1, gi|260871237, geneID|8489930
5905 90630 91823 1194 + 85         Terminase A protein (PACase A protein) (DNA packaging A protein) locus|ECO111_p2-116, protein_id|YP_003238018.1, gi|260871238, geneID|8489931
5906 91823 93307 1485 + -1         Phage terminase, large subunit locus|ECO111_p2-117, protein_id|YP_003238019.1, gi|260871239, geneID|8489932
5907 94800 93913 888 - 605         Mobile element protein locus|ECO111_p2-119, protein_id|YP_003238021.1, gi|260871241, geneID|8489934
5908 95126 94800 327 - -1         Insertion element IS401 (Burkholderia multivorans) transposase locus|ECO111_p2-120, protein_id|YP_003238022.1, gi|260871242, geneID|8489935
5909 95426 96295 870 + 299         putative antirepressor protein locus|ECO111_p2-121, protein_id|YP_003238023.1, gi|260871243, geneID|8489936
5910 97179 96328 852 - 32         C1.100 locus|ECO111_p2-122, protein_id|YP_003238024.1, gi|260871244, geneID|8489937

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|585396.4.peg.5909 putative antirepressor protein
MKANNVKLEKIHAPSVQESELVVVQNQSDEIPVLEWQGVRVVTTETLARGYGTETIRIRQ
NHHENKVRFVEGKHFFKVEGESLRELKHRVALNYSVKIARNVRSLTLWTERGAARHAKML
ETDQAWAFFEKLEDSYFRQKEQQPIAIPQTLPEVLRLAAELAEQKQLLEQKAHQLNQQLV
AAAPKVDFADRVSVAKGILIGNFAKVVGLKQNALFVWLRENGILIASGGRKNVPFQQYIN
AGYFTVKEVVLDDEDGYQIRLTPQLTGKGQQWLTRKLLDAGLLKPVAAE

MD5 = 1ace9a643e896212fbde374bc19ff1c9


  DNA Sequence

>fig|585396.4.peg.5909 putative antirepressor protein
atgaaagcaaataacgttaaattagaaaaaattcatgcaccttcagttcaggaatcggag
ctggtggttgttcagaatcagtctgatgaaattcccgttctggaatggcagggagtgcgt
gtagtgacaaccgagactcttgcgagagggtatgggacagaaacaatccgtattcgccaa
aatcatcatgagaacaaagtacgctttgttgaagggaagcactttttcaaagttgaagga
gaatcattgcgcgagttgaagcacagagtagctttaaactactctgtaaaaattgctcgc
aatgttcgctcactcaccctctggacagaacgcggcgcagcccgccacgctaaaatgctc
gaaaccgatcaggcatgggcattctttgaaaaactggaagacagctacttccgacaaaaa
gaacagcaaccgatcgcaatcccccagacgcttcctgaagtcctacgcctggctgccgaa
ctggctgaacaaaagcaacttctggaacagaaagcccaccagctaaatcagcagctggtg
gccgccgctcctaaagtcgattttgccgaccgggtatcagtagctaaagggatcctgatt
gggaattttgcaaaggttgttggacttaagcaaaacgcgctgtttgtctggttacgggag
aacggcatcctgatagcgtccggtggacgtaaaaatgtgccgttccagcagtacatcaac
gcggggtatttcacggtgaaagaagtggtgctggatgatgaagatggctaccagatacgg
ttgacgcctcaattaacgggtaaaggccagcagtggttgacgcgtaaactgctcgatgct
ggcttgttaaaaccggtggcggctgaataa


  DNA with Flanking Sequence

>fig|585396.4.peg.5909 putative antirepressor protein
gctggtgagcccaccatcaccgcccccggtatcccgctcatgctggcgaacccagacacg
cagagtctccggcgtacagccaatctttggggcaatggaacaaattgccgcccactgtga
gtcatattcatcctgactttccagaaccatacgaatcgcccgctgacggacttcggggga
aaaacgagtatttttagtcatcctgtttacctctttctcagggagtttagtctccaggat
ttccggggcggttcagaacgtcattagtcacccgtgaagagatgatcgaggcaattgaac
agcacacaatctgtatcagcaccagggatatacctggcgttattgccaactacttcatga
tcaccaaacaactttaccggagaaaggacaagaacgcggttcaccgtatcctgttgtctg
atatccgcgaatacctgctcgaacagggtcatctgaattacgcaaccgtcgcagccgaag
cacgcaaggaggcacacagaatgaaagcaaataacgttaaattagaaaaaattcatgcac
cttcagttcaggaatcggagctggtggttgttcagaatcagtctgatgaaattcccgttc
tggaatggcagggagtgcgtgtagtgacaaccgagactcttgcgagagggtatgggacag
aaacaatccgtattcgccaaaatcatcatgagaacaaagtacgctttgttgaagggaagc
actttttcaaagttgaaggagaatcattgcgcgagttgaagcacagagtagctttaaact
actctgtaaaaattgctcgcaatgttcgctcactcaccctctggacagaacgcggcgcag
cccgccacgctaaaatgctcgaaaccgatcaggcatgggcattctttgaaaaactggaag
acagctacttccgacaaaaagaacagcaaccgatcgcaatcccccagacgcttcctgaag
tcctacgcctggctgccgaactggctgaacaaaagcaacttctggaacagaaagcccacc
agctaaatcagcagctggtggccgccgctcctaaagtcgattttgccgaccgggtatcag
tagctaaagggatcctgattgggaattttgcaaaggttgttggacttaagcaaaacgcgc
tgtttgtctggttacgggagaacggcatcctgatagcgtccggtggacgtaaaaatgtgc
cgttccagcagtacatcaacgcggggtatttcacggtgaaagaagtggtgctggatgatg
aagatggctaccagatacggttgacgcctcaattaacgggtaaaggccagcagtggttga
cgcgtaaactgctcgatgctggcttgttaaaaccggtggcggctgaataatggaagaatg
cccggttgatgccgggcataatttattgcgcgctttcggggttgtcgtttactggctgcc
ccttcttggttttacggctgcgcgcaactgatgcggctgacttaacctttttctcttcgc
gagtgatggcaatttgtttttttacattttcaatatctgccaggcgatatatttttgcct
gcggccagcggtcgcagatgatcggttctatagagtcataaaggctaaattttgctttct
cgaattcaccgttgatgatgattccatcacggagagtttcatcgcagataaacacaccac
acagcggcacatggtaactaactgatttaccatcattgtagttagggctactggaaatgt
aatggacgcgcagcattgtttcgctaaagccgtgtacacgcatacggaatttttcatcct
ccgggtactgcttcattagctcttttgttgcttccaggttctctatgtatttcgcactgt
gctcattgat


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No essentially identical proteins found

  Links to Related Entries in Other Sites

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  Functional Coupling

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  Attributes

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  Protein Families

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