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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|575604.3.peg.975: Lactobacillus gasseri SV-16A-US

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NCBI Taxonomy Id: 575604

Current Assignment: Phage protein
Translate Function Assignments



Context on contig ADDY01000015 from base 121774 to 133403 (11630 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
965 122364 121774 591 -           Lj965 prophage replication protein  
966 122336 122494 159 + -29         hypothetical protein  
967 123289 122486 804 - -9         Lj928 prophage protein  
968 124182 123292 891 - 2         Lj928 prophage replication protein  
969 124365 124213 153 - 30         Lj928 prophage recombination protein  
970 124797 124513 285 - 147         hypothetical protein  
971 125599 124811 789 - 13         Phage antirepressor protein  
972 125839 125612 228 - 12         hypothetical protein  
973 125989 126597 609 + 149         SOS-response repressor and protease LexA (EC 3.4.21.88)  
974 126608 127201 594 + 10         hypothetical protein  
975 127226 127879 654 + 24         Phage protein  
976 128066 129190 1125 + 186         putative integrase  
977 129900 129304 597 - 113     9: 1 4 9 5 7 10 2 8 6   Dephospho-CoA kinase (EC 2.7.1.24)  
978 130727 129897 831 - -4     1: 3   Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)  
979 133403 130743 2661 - 15         DNA polymerase I (EC 2.7.7.7)  

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|575604.3.peg.975 Phage protein
MGLRDAFKKFNDSAEKMRDQVSDMTNSCVSDPSGNFMYSDENKILSFKKEPRIPQDFIPY
SDVVGAELQENGKTTHSLNIARGIGLGLATGGYGAIAGLVTGGKKKQKVELTIVIKFRNR
KDEKIEYYKGKIKGTDTVYRENIVPKAVALVNLINSFPQKALNNSNDQSFDESSPSDNQS
SPAADPLDEIKKLKGLLDMGAITPEEFDAKKKQLLNL

MD5 = 4535f0b0fb025fa23cf433370ed10a17


  DNA Sequence

>fig|575604.3.peg.975 Phage protein
atgggactaagagacgcatttaaaaagtttaatgacagtgctgaaaaaatgagagatcaa
gtatcagatatgactaactcttgtgtatctgatccaagtggcaactttatgtacagtgat
gaaaataaaattttatcctttaaaaaagagcctagaataccgcaagatttcatcccctat
tcagacgtagttggtgcagaattacaagaaaacggcaaaaccacgcatagtttaaatatt
gctcgtggaattggattaggtttagcaaccggtggctatggcgctattgctggtcttgtt
actggtggtaagaaaaaacaaaaagttgagcttactattgttattaaatttagaaataga
aaagatgaaaaaatagaatattataaaggcaaaattaaaggaacagatacagtctataga
gaaaacattgttccaaaagctgttgctttagtgaacttaattaatagttttcctcaaaaa
gctcttaataattctaatgaccagtcttttgatgaatcttctccatcagataatcaatca
tcccctgctgccgatcccttagacgaaatcaaaaagctcaaaggcttgctagacatggga
gcaattacgccagaagagtttgatgccaaaaagaagcagctgctaaacttataa


  DNA with Flanking Sequence

>fig|575604.3.peg.975 Phage protein
ccggaattaaatttctaaaagaattaggcttacctgatcctagagacgaaagaactatcc
tttctgataaaatttatcagcatattactggcgtacttggtgcagaagcagaacttcatt
acaaaatgggattatgggatgaagctgaaaatgaatatcttcaaattttctatttaagta
tttatcatacagatgccttaagaatactatattctaaagaacatcgttatagggatgcag
tgtatattcttgagtttactatgcaaactattttagattttcctcaattattttataaag
aagattatgccaagctttctttaactcaagaaaaaacacagaaactagctgaaaaaaaac
aagcactagataaatcatgcttatcaagtgataaaaaagctttattatctcaaatagcta
gtaacaattttctaagaatcaaaaattggacaaatgaaattgaaaaggaaaaataatgta
tattttgggaggaagtaaaaatgggactaagagacgcatttaaaaagtttaatgacagtg
ctgaaaaaatgagagatcaagtatcagatatgactaactcttgtgtatctgatccaagtg
gcaactttatgtacagtgatgaaaataaaattttatcctttaaaaaagagcctagaatac
cgcaagatttcatcccctattcagacgtagttggtgcagaattacaagaaaacggcaaaa
ccacgcatagtttaaatattgctcgtggaattggattaggtttagcaaccggtggctatg
gcgctattgctggtcttgttactggtggtaagaaaaaacaaaaagttgagcttactattg
ttattaaatttagaaatagaaaagatgaaaaaatagaatattataaaggcaaaattaaag
gaacagatacagtctatagagaaaacattgttccaaaagctgttgctttagtgaacttaa
ttaatagttttcctcaaaaagctcttaataattctaatgaccagtcttttgatgaatctt
ctccatcagataatcaatcatcccctgctgccgatcccttagacgaaatcaaaaagctca
aaggcttgctagacatgggagcaattacgccagaagagtttgatgccaaaaagaagcagc
tgctaaacttataaaatctgctttttataaaatataaaaaagacctactaatgcaccaac
atcagtaggtcaaacaaatgagctacgccaatagctcatccgtaaactttgaataaaatt
aacaaaaccatcattaaacagttctgctatcttctattttagcagacttttaatgatgcc
aaaataggaggttttttattatgccaaaacaattgaataaggaaattacaaaatacactt
taaaatctgggaaagttagatatagatttaaaacatatctaggcatggacgatagtggca
agcgtgttatggttactcgccaaggctttaaaacatatcaagaagctaatgctgtctata
agaaacttcgtgctaaaggtacccagggatacacaaagcctaagcaagccacggttgaac
aagtttggactctctggttcgatacttacaaaaaacacgcaaaagaatccacagctcata
agatgcagcaaacatatgataaccatgtaaaaaa


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

This PEG has no links.
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  Functional Coupling

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  Attributes

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  Protein Families

No protein families found

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