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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|575604.3.peg.973: Lactobacillus gasseri SV-16A-US

This feature in The SEED Viewer

NCBI Taxonomy Id: 575604

Current Assignment: SOS-response repressor and protease LexA (EC 3.4.21.88)
Translate Function Assignments



Context on contig ADDY01000015 from base 121208 to 133403 (12196 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
964 121510 121208 303 -           hypothetical protein  
965 122364 121774 591 - 263         Lj965 prophage replication protein  
966 122336 122494 159 + -29         hypothetical protein  
967 123289 122486 804 - -9         Lj928 prophage protein  
968 124182 123292 891 - 2         Lj928 prophage replication protein  
969 124365 124213 153 - 30         Lj928 prophage recombination protein  
970 124797 124513 285 - 147         hypothetical protein  
971 125599 124811 789 - 13         Phage antirepressor protein  
972 125839 125612 228 - 12         hypothetical protein  
973 125989 126597 609 + 149         SOS-response repressor and protease LexA (EC 3.4.21.88)  
974 126608 127201 594 + 10         hypothetical protein  
975 127226 127879 654 + 24         Phage protein  
976 128066 129190 1125 + 186         putative integrase  
977 129900 129304 597 - 113     9: 1 4 9 5 7 10 2 8 6   Dephospho-CoA kinase (EC 2.7.1.24)  
978 130727 129897 831 - -4     1: 3   Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)  
979 133403 130743 2661 - 15         DNA polymerase I (EC 2.7.7.7)  

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|575604.3.peg.973 SOS-response repressor and protease LexA (EC 3.4.21.88)
MRSSEEIIDYLNQLREEQDVSISELARRVGMAKSGVSRYFNHTREFPINRAPAFAKALHI
KTEDLLGLEPINQNKPRMVPLLGTIAMGAPITAEQNIEKYIPEYMMDRYADDTLFALRCQ
GDSMYPLIPNGAIAIIRQQADVEDGEVAAVLINGEATLKKVLHVGKTVVLRPANPDYKDI
ILDKDHPGTILGKMIKYEMNFD

MD5 = 746413605de5f70149033c9bfc674bdd


  DNA Sequence

>fig|575604.3.peg.973 SOS-response repressor and protease LexA (EC 3.4.21.88)
atgcgcagtagtgaagaaataattgattatttaaatcaactaagagaagagcaagacgta
tcaattagtgaattagctagacgcgttggaatggccaaatcaggtgtgtccagatacttc
aaccacacaagagaatttcctataaatagagcaccagcttttgcaaaagcactacatatt
aaaaccgaagatttattagggcttgaacctattaatcaaaataagccaagaatggttcct
ttattaggaactatagcgatgggagcgccaattactgcagaacaaaatatagaaaaatat
ataccagaatatatgatggatagatatgcagatgacactctttttgctcttagatgtcaa
ggcgatagcatgtaccctcttatacctaatggagcaattgccataattagacaacaagcc
gatgtagaagatggagaggtagctgcagtcttgattaatggcgaggcaacccttaaaaag
gttcttcatgttggtaaaacagtagtgctaaggccagctaatcctgattataaagacata
atattagacaaagatcatcctgggactattctaggcaagatgattaaatatgaaatgaat
tttgattag


  DNA with Flanking Sequence

>fig|575604.3.peg.973 SOS-response repressor and protease LexA (EC 3.4.21.88)
ttgagaaatccattcagaatacttctttttagctcctaaagttttatgcaaatctctagc
tgaaacaagttgctgatcgttttggacttttatattaattatttcgttcatttgttcatc
tccttaatgttcactattgtgaacgtcttttgcaaaaaaaagcgaaatttgtttcttttc
gaaacctagtacacttaagatcttgacaaattcttccataccaatgtcacgttctccatt
ctcctttctccaataggcattcgtactaatgcctattttacgtgccatttgagcttgtgt
aattcctcgtgctacacgctcaccttttaaacgttgcaaatcaaacttcattattccacc
tcaattcgttcactttgaagaacaactatataatattcttatcgtattcttttgtcaaca
aaaaacataaaaaaagataaaaaatgtatttttttgtcaacaagtggagtattattagta
ttaagagatgaggtgaaataatgcgcagtagtgaagaaataattgattatttaaatcaac
taagagaagagcaagacgtatcaattagtgaattagctagacgcgttggaatggccaaat
caggtgtgtccagatacttcaaccacacaagagaatttcctataaatagagcaccagctt
ttgcaaaagcactacatattaaaaccgaagatttattagggcttgaacctattaatcaaa
ataagccaagaatggttcctttattaggaactatagcgatgggagcgccaattactgcag
aacaaaatatagaaaaatatataccagaatatatgatggatagatatgcagatgacactc
tttttgctcttagatgtcaaggcgatagcatgtaccctcttatacctaatggagcaattg
ccataattagacaacaagccgatgtagaagatggagaggtagctgcagtcttgattaatg
gcgaggcaacccttaaaaaggttcttcatgttggtaaaacagtagtgctaaggccagcta
atcctgattataaagacataatattagacaaagatcatcctgggactattctaggcaaga
tgattaaatatgaaatgaattttgattagaggataagtaatgaatcaacgtattaatcca
gcaactggctatcctatgtctactgataaacaaattaaagtaaaaaaagaagcagtgtct
atggttaaggcctttcatgaggaaaatccgcatgaagccggaattaaatttctaaaagaa
ttaggcttacctgatcctagagacgaaagaactatcctttctgataaaatttatcagcat
attactggcgtacttggtgcagaagcagaacttcattacaaaatgggattatgggatgaa
gctgaaaatgaatatcttcaaattttctatttaagtatttatcatacagatgccttaaga
atactatattctaaagaacatcgttatagggatgcagtgtatattcttgagtttactatg
caaactattttagattttcctcaattattttataaagaagattatgccaagctttcttta
actcaagaaaaaacacagaaactagctgaaaaaaaacaagcactagata


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

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  Functional Coupling

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  Attributes

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  Protein Families

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