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SEED version cvs.1555556707 (3/17/2019 22:5:7) on aspen.cels.anl.gov
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Protein fig|575604.3.peg.970: Lactobacillus gasseri SV-16A-US

This feature in The SEED Viewer

NCBI Taxonomy Id: 575604

Current Assignment: hypothetical protein
Translate Function Assignments


Context on contig ADDY01000015 from base 119101 to 129900 (10800 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
960 119562 119101 462 -           Holliday junction resolvase  
961 119720 119559 162 - -4         hypothetical protein  
962 120306 120037 270 - 316         hypothetical protein  
963 120710 120324 387 - 17         Lj928 prophage protein  
964 121510 121208 303 - 497         hypothetical protein  
965 122364 121774 591 - 263         Lj965 prophage replication protein  
966 122336 122494 159 + -29         hypothetical protein  
967 123289 122486 804 - -9         Lj928 prophage protein  
968 124182 123292 891 - 2         Lj928 prophage replication protein  
969 124365 124213 153 - 30         Lj928 prophage recombination protein  
970 124797 124513 285 - 147         hypothetical protein  
971 125599 124811 789 - 13         Phage antirepressor protein  
972 125839 125612 228 - 12         hypothetical protein  
973 125989 126597 609 + 149         SOS-response repressor and protease LexA (EC 3.4.21.88)  
974 126608 127201 594 + 10         hypothetical protein  
975 127226 127879 654 + 24         Phage protein  
976 128066 129190 1125 + 186         putative integrase  
977 129900 129304 597 - 113     9: 2 7 4 8 3 5 6 1 9   Dephospho-CoA kinase (EC 2.7.1.24)  

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|575604.3.peg.970 hypothetical protein
MDLINSNALRSIIREEIPDVSNNLLTKKDAKSLIKKYASQGYFNVGDAANYCGVSRSTFD
KWRKDGIITPRIVCGVVRYARADLDRMMSNDEMV

MD5 = 066c40947f56e5aa98b8597f430a44cd


  DNA Sequence

>fig|575604.3.peg.970 hypothetical protein
atggatttaataaattcaaacgctcttcgctcaattattagagaagaaataccggacgtg
agtaacaatttgctaacgaaaaaagatgctaaatctttgattaaaaaatacgcatcacaa
gggtatttcaatgtaggggatgctgctaactattgcggagttagccgaagtacttttgat
aaatggcgaaaagatggaataattacaccccgcattgtttgcggagtagttagatatgca
agagcagatttagataggatgatgagcaacgatgagatggtttaa


  DNA with Flanking Sequence

>fig|575604.3.peg.970 hypothetical protein
gaactggaacaatccagatatgattatgcagcgtgcattaaacatcgcaagcagtcgtgt
aaagctacttgaaaataagaataaggaacttgaagacgtcaatgcaaagcaggcagaaaa
aattgccaaagatgctgacgatgtagtttttgcaaaagctattagatacagccaccatgc
aattactattgctgaattagctgacatcttaacacaaaatggctttgtaatcggccgtaa
tcaactatttcaattgttaagacatgctaaatatttatcacaccaaagaagtacctggaa
cttacctatgaccgacaaggtcaaaagaggatatttccgaataacccacagacttacaag
agataatcgtccatattcacaagtgtttgtgacaccgaaaggacagaaacacatcatcaa
taaggctctacgtgggaagtttgatgatatttatcaagacgttatggtaaccacgtttga
tgtttagtaaggagtttgagatggatttaataaattcaaacgctcttcgctcaattatta
gagaagaaataccggacgtgagtaacaatttgctaacgaaaaaagatgctaaatctttga
ttaaaaaatacgcatcacaagggtatttcaatgtaggggatgctgctaactattgcggag
ttagccgaagtacttttgataaatggcgaaaagatggaataattacaccccgcattgttt
gcggagtagttagatatgcaagagcagatttagataggatgatgagcaacgatgagatgg
tttaacaaaatagtaaataattggtttcacattgatttgaattgtagagaaacagatttt
ttagcactaggcggatttattggggtatttatcacgttcatattcacaatgtttaccgcg
atttttccgaatatttaaggagggtgaatgaaatgagtttagaaacacgattaatcagta
gcagcaatgcttttttcacaaaagaaactaagcagcaattcattgaagatgagtatcaac
gtcaatttagaacggatttaatgtcaacaaaaaagccgctaactgcgccaacagctaacg
actagaaaaatatatagaaccaaaggaattataacatgaataagattaacaaaacacaag
cattaattacatttgaaaatgagaactttccaattaattttgagccagcaaaagtagact
ttcctggctatcaagatttaaaagcaaaagtagatgagatagcccagggctgggatacct
atgtagtaacttctaagtcctaccc


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

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  Functional Coupling

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  Attributes

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  Protein Families

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