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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|575604.3.peg.962: Lactobacillus gasseri SV-16A-US

This feature in The SEED Viewer

NCBI Taxonomy Id: 575604

Current Assignment: hypothetical protein
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Context on contig ADDY01000015 from base 114696 to 125599 (10904 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
952 115409 114696 714 -           ParB domain protein nuclease  
953 115909 115412 498 - 2         hypothetical protein  
954 116574 115921 654 - 11         FIG00742244: hypothetical protein  
955 116982 116614 369 - 39         hypothetical protein  
rna.14 117186 117112 75 - 129         tRNA-Phe-GAA  
956 118460 117963 498 - 776         hypothetical protein  
957 118667 118476 192 - 15         hypothetical protein  
958 118824 118690 135 - 22         FIG00754532: hypothetical protein  
959 119020 118883 138 - 58         hypothetical protein  
960 119562 119101 462 - 80         Holliday junction resolvase  
961 119720 119559 162 - -4         hypothetical protein  
962 120306 120037 270 - 316         hypothetical protein  
963 120710 120324 387 - 17         Lj928 prophage protein  
964 121510 121208 303 - 497         hypothetical protein  
965 122364 121774 591 - 263         Lj965 prophage replication protein  
966 122336 122494 159 + -29         hypothetical protein  
967 123289 122486 804 - -9         Lj928 prophage protein  
968 124182 123292 891 - 2         Lj928 prophage replication protein  
969 124365 124213 153 - 30         Lj928 prophage recombination protein  
970 124797 124513 285 - 147         hypothetical protein  
971 125599 124811 789 - 13         Phage antirepressor protein  

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|575604.3.peg.962 hypothetical protein
MKVIDKRTERNNDWHIGDVICYWNKPAEKHYGLICEIKLPTDSGFGVIDLENKTESLVSF
TFPLIDDLQHLVRSEYRYVEKVNAKLVIE

MD5 = 93aa7a4b12a1cbe282280dda5f03596c


  DNA Sequence

>fig|575604.3.peg.962 hypothetical protein
atgaaagtaattgataagcgaacagaaagaaataatgattggcatattggagatgtaatt
tgctactggaataagcctgctgaaaagcattacggcttaatttgtgaaataaagctccct
actgatagcgggtttggagtaatagatttagaaaataaaacagaatcattagtttcattt
acctttcctttaattgatgatttacagcatcttgttagaagtgaatatcgttatgtcgaa
aaagtaaacgcaaagctggtgatcgaatga


  DNA with Flanking Sequence

>fig|575604.3.peg.962 hypothetical protein
tgtaaagatcctaactatgaatgggtgaattgcataaaataccttttcgatcgttcagat
tcaacactaaatattagtggtgattttggatgtgcggtgttctgttgggattcgagtcgc
aatactttacgagatatcgcaaaatacagtaaaagtttaggttattttgcctctaaagca
cgtgcagcagaagaactatggaattatgattacggtcttttagatgaacagcttaatgaa
tatttagaattatccgatgaaaatgatgattactatttgtcaaaatcagaacgtcaagaa
ttaaaggaatcgcttttggaaaactgggacgagagaagtggttatcacatgaactctgat
ttagaagggaagctagcagattttgatccggattattgggaaaacttgcctgatggaaaa
gtgattagtgactggataaaggcttatgcttatggactacaaaagtggctagaacaggat
taaattaggaggattaggcaatgaaagtaattgataagcgaacagaaagaaataatgatt
ggcatattggagatgtaatttgctactggaataagcctgctgaaaagcattacggcttaa
tttgtgaaataaagctccctactgatagcgggtttggagtaatagatttagaaaataaaa
cagaatcattagtttcatttacctttcctttaattgatgatttacagcatcttgttagaa
gtgaatatcgttatgtcgaaaaagtaaacgcaaagctggtgatcgaatgatgactaaaca
acaagaaaaatgcccatattgtaagggcgtaaaaagaattagaaatgatctagttcatta
tactttcagacatatcgtcaaaattcaaaatggtaatgaattatggtcaatagtgattac
taataaccatgaatataaaaccatggcttatattgaatactgccctaaatgtgggaggaa
gctatgaagcaattattacttacgaagtttaattgaggataaagtagcatgtcagattgg
gtttttgcagcagcattcttagttctgctagctatagttattttggtggtaggagcgatg
taagacatggaacaaatttcagaaaatacctattttttaaatccagaaaaatggcaaaac
atagctaacataattggtggtttagagatttgcgatagtgaaacaggctggcctattggt
gtgcttaaacctgctggaattgaatattatgaggatattgacgattgagagttaacttta
cgattgaagg


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

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  Functional Coupling

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  Attributes

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  Protein Families

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