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SEED version cvs.1555556707 (3/17/2019 22:5:7) on aspen.cels.anl.gov
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Protein fig|575604.3.peg.949: Lactobacillus gasseri SV-16A-US

This feature in The SEED Viewer

NCBI Taxonomy Id: 575604

Current Assignment: Terminase large subunit [Bacteriophage A118]
Translate Function Assignments


Context on contig ADDY01000015 from base 107660 to 119020 (11361 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
944 108049 107660 390 -           FIG00754064: hypothetical protein  
945 109120 108068 1053 - 18         minor capsid protein  
946 109754 109125 630 - 4         Phage capsid scaffolding protein  
947 110817 109849 969 - 94         Phage minor capsid protein  
948 112579 110945 1635 - 127         minor capsid protein  
949 113899 112592 1308 - 12         Terminase large subunit [Bacteriophage A118]  
950 114542 113865 678 - -35         FIG00746678: hypothetical protein  
951 114695 114558 138 - 15         hypothetical protein  
952 115409 114696 714 - 0         ParB domain protein nuclease  
953 115909 115412 498 - 2         hypothetical protein  
954 116574 115921 654 - 11         FIG00742244: hypothetical protein  
955 116982 116614 369 - 39         hypothetical protein  
rna.14 117186 117112 75 - 129         tRNA-Phe-GAA  
956 118460 117963 498 - 776         hypothetical protein  
957 118667 118476 192 - 15         hypothetical protein  
958 118824 118690 135 - 22         FIG00754532: hypothetical protein  
959 119020 118883 138 - 58         hypothetical protein  

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|575604.3.peg.949 Terminase large subunit [Bacteriophage A118]
MTAIVKLSQEINPHFYPAWNSNKPYQVYKGGRGSFKSSVISFKLVTTMMRYIAQNKTVNV
ICVRENQRYLRDSVYNQILWAMTKLHVGSEFRTRVSPLTITHIRTGSTFYFYGANDPMKL
KSNIVGNVVAVWYEEFANLKNADVFDQATPTFIRQKPDFVDQVKVYISYNPPRNPYAWVN
EWITQHETDPDYFIDTSTYLDDKLGFTTKQQLNLIETYKRNDPDYYRWLYLGEAVGLGTN
VYNMDLFKLVDKLPDDEYITEVFYGMDTGFMVSATACVACAFTNKYNVYVLDTFYYDPTK
YVRKLSASEQAERVHDFINEITNKYGMLPYNQTIDSADGGIYTQYWQMYNTQWSKVHKSS
EAAMIDRVQDLLAQGRLFVIKTAGNNIFLDEHKKYQWDPATVNSDNPRVVKEDDHSCDAL
KYGIVDNERLLGLSA

MD5 = bd6d2f0974904b2765fbcdbe734b82c3


  DNA Sequence

>fig|575604.3.peg.949 Terminase large subunit [Bacteriophage A118]
atgacggcaatagtgaagctgagtcaagagattaatccccacttttatccagcttggaac
agtaataaaccctatcaagtgtataagggcggtcgtggttcgtttaagtcttcagtaatt
agttttaagctagttactacaatgatgcgatatattgctcaaaacaagacggtaaatgtt
atttgcgtgcgtgagaatcaacgatatttacgagacagtgtgtataaccagattttgtgg
gcaatgactaagttacacgttggaagtgagtttagaactcgtgtctcgcctttaacaatt
actcatatccggacgggatcaacattctacttctatggtgctaatgatcctatgaagctt
aagtccaacatagttggtaacgtggtagctgtttggtatgaagaatttgctaacttaaag
aatgctgacgtatttgaccaagccactccaacatttatcagacaaaagccagattttgtt
gatcaagtcaaggtctatatctcatataatcctccacgtaatccatatgcgtgggtaaat
gaatggataacacagcatgaaacagatccagattatttcattgatacaagcacttattta
gatgacaagctaggctttactactaagcagcaattaaatctaattgagacatacaagcgc
aatgaccctgattattatcgttggctctatctcggtgaagcagtaggacttggaacaaac
gtgtacaatatggacttatttaagcttgtggataagttgccagatgatgagtacattaca
gaagtcttttacggcatggatacaggatttatggtatcagcgactgcttgcgtggcgtgt
gctttcactaataaatataacgtgtatgtactagatactttttactacgatccaactaag
tacgttcgtaagttgtcagcatctgaacaagccgaacgagtacatgatttcattaacgag
ataaccaataaatatgggatgctcccgtataatcagacaattgactctgcagatggtggt
atctacacgcaatattggcaaatgtataacacgcaatggtctaaggtgcataaatctagt
gaggcagcaatgattgaccgagttcaagatctattggcacaagggcgcctatttgtgatt
aagacagcgggaaacaacatttttttagacgagcataaaaaataccagtgggacccagct
actgttaatagtgacaatccaagagtagtcaaagaagatgatcactcttgtgatgctctt
aagtacggcatagtagataatgaacgcttacttggattatcagcataa


  DNA with Flanking Sequence

>fig|575604.3.peg.949 Terminase large subunit [Bacteriophage A118]
gaaaaacaaatatccggctatttcggccgccctaaaaaagaataaggacattgttgatgc
tgaagtcgaagaatcttttgtttcgacaatgaaaaagcacaccctcacgaccattcagta
caaaatggtcaagaaagataaatttgtgctgcaaggtgaacgacaaaagttcatgaatat
gtataaaatggatcatcctaatgcaagtaagcaagatattttaattgctacggctgaaaa
tgttgatgtttatgaacaaattccagttgttaagactgttaccgaagttgatccaaacat
ttcagcaatgattttttggttgaagaaccgtagacctgatgtttaccgtgaccagacatt
ccagaaacttaatgaagctaatgctcgtaagacgcttgctgaagctcaacttagtgaagc
acagcttaaggcacttgaagaaagtgatgatccaagcaataagacaatcattgtagacga
tataaaggaggttaaatcagatgacggcaatagtgaagctgagtcaagagattaatcccc
acttttatccagcttggaacagtaataaaccctatcaagtgtataagggcggtcgtggtt
cgtttaagtcttcagtaattagttttaagctagttactacaatgatgcgatatattgctc
aaaacaagacggtaaatgttatttgcgtgcgtgagaatcaacgatatttacgagacagtg
tgtataaccagattttgtgggcaatgactaagttacacgttggaagtgagtttagaactc
gtgtctcgcctttaacaattactcatatccggacgggatcaacattctacttctatggtg
ctaatgatcctatgaagcttaagtccaacatagttggtaacgtggtagctgtttggtatg
aagaatttgctaacttaaagaatgctgacgtatttgaccaagccactccaacatttatca
gacaaaagccagattttgttgatcaagtcaaggtctatatctcatataatcctccacgta
atccatatgcgtgggtaaatgaatggataacacagcatgaaacagatccagattatttca
ttgatacaagcacttatttagatgacaagctaggctttactactaagcagcaattaaatc
taattgagacatacaagcgcaatgaccctgattattatcgttggctctatctcggtgaag
cagtaggacttggaacaaacgtgtacaatatggacttatttaagcttgtggataagttgc
cagatgatgagtacattacagaagtcttttacggcatggatacaggatttatggtatcag
cgactgcttgcgtggcgtgtgctttcactaataaatataacgtgtatgtactagatactt
tttactacgatccaactaagtacgttcgtaagttgtcagcatctgaacaagccgaacgag
tacatgatttcattaacgagataaccaataaatatgggatgctcccgtataatcagacaa
ttgactctgcagatggtggtatctacacgcaatattggcaaatgtataacacgcaatggt
ctaaggtgcataaatctagtgaggcagcaatgattgaccgagttcaagatctattggcac
aagggcgcctatttgtgattaagacagcgggaaacaacatttttttagacgagcataaaa
aataccagtgggacccagctactgttaatagtgacaatccaagagtagtcaaagaagatg
atcactcttgtgatgctcttaagtacggcatagtagataatgaacgcttacttggattat
cagcataaggcggtgagtatatgggattatgggcaagcattaaaggattatttagaaaag
gtggtgctaaattaggaatgattaaatcattaggagctattacagacgatccacggattg
cagtacctgcagaagagtacacacgcatccgaaaagctaaagactattattctgataagc
cacaggatgttcattattgggtgctagggcatgaaaagaaacgcaagatgaataccgtta
acatgacgcaaaaagcatctaagcgcttagcatcaatcatcttcaacgaacaatgttcga
taaaagttaatgataatgaactccaggaacaacttgataaaatctttcgtgaaagtcgct
tttacaccacttttgaaactaatttacagcgtgctattgctttaggttctagtgcaatta
gaccttatgttgaagatgacacaattaaattgaactggtctgacgcattaggtgtatatc
cattaaatgctaacactacagaagttag


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

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  Functional Coupling

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  Attributes

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Key
Link Explains Key		 Value


  Protein Families

No protein families found

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