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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|572547.3.peg.1177: Aminobacterium colombiense DSM 12261

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NCBI Taxonomy Id: 572547

Current Assignment: Phage transcriptional regulator cro
Translate Function Assignments



Context on contig NC_014011 from base 1157600 to 1168100 (10501 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
1167 1157959 1157600 360 -       1: 1   hypothetical protein locus|Amico_1134, protein_id|YP_003553981.1, gi|294102123, InterPro:IPR001589, geneID|8964078
1168 1158113 1157970 144 - 10     1: 1   hypothetical protein locus|Amico_1135, protein_id|YP_003553982.1, gi|294102124, geneID|8964079
1169 1158990 1158217 774 - 103         Phage antirepressor protein locus|Amico_1136, protein_id|YP_003553983.1, gi|294102125, InterPro:IPR003497, InterPro:IPR005039, geneID|8964080
1170 1159142 1158987 156 - -4     1: 1   hypothetical protein locus|Amico_1137, protein_id|YP_003553984.1, gi|294102126, geneID|8964081
1171 1159339 1159139 201 - -4     1: 1   hypothetical protein locus|Amico_1138, protein_id|YP_003553985.1, gi|294102127, geneID|8964082
1172 1159566 1159342 225 - 2     1: 1   hypothetical protein locus|Amico_1139, protein_id|YP_003553986.1, gi|294102128, geneID|8964083
1173 1159831 1159556 276 - -11     1: 1   hypothetical protein locus|Amico_1140, protein_id|YP_003553987.1, gi|294102129, geneID|8964084
1174 1160398 1160231 168 - 399     1: 1   hypothetical protein locus|Amico_1141, protein_id|YP_003553988.1, gi|294102130, InterPro:IPR001387, geneID|8964085
1175 1160642 1161322 681 + 243         Phage repressor protein cI locus|Amico_1142, protein_id|YP_003553989.1, gi|294102131, InterPro:IPR001387, InterPro:IPR019759, geneID|8964086
1176 1161394 1162812 1419 + 71     1: 1   hypothetical protein locus|Amico_1143, protein_id|YP_003553990.1, gi|294102132, geneID|8964087
1177 1162873 1163148 276 + 60         Phage transcriptional regulator cro locus|Amico_1144, protein_id|YP_003553991.1, gi|294102133, geneID|8964088
1178 1163385 1163717 333 + 236     1: 1   hypothetical protein locus|Amico_1145, protein_id|YP_003553992.1, gi|294102134, geneID|8964089
1179 1163794 1164873 1080 + 76         beta-lactamase-like protein locus|Amico_1146, protein_id|YP_003553993.1, gi|294102135, InterPro:IPR005135, geneID|8964090
1180 1164993 1166684 1692 + 119     1: 1   hypothetical protein locus|Amico_1147, protein_id|YP_003553994.1, gi|294102136, geneID|8964091
1181 1166793 1167695 903 + 108         DNA-methyltransferase locus|Amico_1148, protein_id|YP_003553995.1, gi|294102137, InterPro:IPR002294, InterPro:IPR012327, geneID|8964092
1182 1168100 1167786 315 - 90     1: 1   hypothetical protein locus|Amico_1149, protein_id|YP_003553996.1, gi|294102138, geneID|8964093

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  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|572547.3.peg.1177 Phage transcriptional regulator cro
MEGAGIPDRSTVVVNPAEEVYDGDTALVCFGRQNEWAIKWVYFNKADGSVEIRSAAPQYK
PMVFTKEDIELGLFCIVGKVTRLTAEPRKGI

MD5 = 587618dc605bc9027a6e221bee44aaf9


  DNA Sequence

>fig|572547.3.peg.1177 Phage transcriptional regulator cro
atggaaggcgcaggaattcccgacagaagtacagtcgtcgtgaatcctgcagaagaagtt
tatgacggtgatacggcattagtgtgttttggccgccaaaacgaatgggcaataaagtgg
gtgtattttaataaggctgacggttctgttgaaatccgttcagcagcccctcagtataag
cctatggtttttacaaaagaagatatagagctcgggctcttttgcatagtagggaaggtg
acacgtttaacagcagaaccaagaaaggggatctaa


  DNA with Flanking Sequence

>fig|572547.3.peg.1177 Phage transcriptional regulator cro
ttgaaagcctacgaaaagaatatggtatttcagaaaaagaagaggcggatatactctttg
aggcaaacatcatgggctggagaggccccaatgaggagaaatacgccaaggacggctatt
atatccccaaggaagaggtcggcaaggaatggtatcagtgcggcacacttcactcttcat
cttccgatgaatggctggaagcttctcaccagaacaggatagcaacttgcgccgactatc
ttttaaagctttacgaagacgacacgttgaatattagccttcctcccaagaagaatatgc
catctttgctccatgaggtaaaaaaatacgctgaagaaatggcggtggccatagatgaag
tgttccgttccagcgaagaaaaactcagtgtttcggaaacggcggcattgctgatggttc
aagccgggtggctagattaaggagcaatttctgtagatgccgataaacatccttttgccg
tctttgtagagggggactctatggaaggcgcaggaattcccgacagaagtacagtcgtcg
tgaatcctgcagaagaagtttatgacggtgatacggcattagtgtgttttggccgccaaa
acgaatgggcaataaagtgggtgtattttaataaggctgacggttctgttgaaatccgtt
cagcagcccctcagtataagcctatggtttttacaaaagaagatatagagctcgggctct
tttgcatagtagggaaggtgacacgtttaacagcagaaccaagaaaggggatctaataga
tttttagcgaaaggagtttttattaatgtctaaaaagaaaaaatggttattcatttttct
aggcttagtattccttgctattttcactactgcaatgttgccagaagaaaagaaccaaga
aagatctaaacaagagcaaactgtaccactagaagttgcttcagagctacctaaagctcc
tacacctaccagggaacctataataactatcgacccagacctttttaactctatgcttac
agaaagagcacataagttgccatacttccctaaaggaacaatcgaaatcgaagaaataaa
aaatgatgttattcgcatgtggttttattttgacgaaatgccaacatctaccaatgttat
tgagataacggggaaaagaatagtaaaaacggcaatagatattttaatggaaaatgaaat
cgatccttgtgatccatctgtttttatacgaacagtagtagctaaaaaagaaaaaggcgt
aacaggcaaaaacctt


  Assignments for Essentially Identical Proteins

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  Links to Related Entries in Other Sites

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  Functional Coupling

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  Attributes

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  Protein Families

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