Protein Page for fig|572547.3.peg.1159

SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov

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Protein fig|572547.3.peg.1159: Aminobacterium colombiense DSM 12261

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NCBI Taxonomy Id: 572547

Current Assignment: Phage integrase

Translate Function Assignments

Context on contig NC_014011 from base 1146632 to 1158990 (12359 bp)


Fid	Start	End	Size (nt)		Gap	SS	Function	Aliases
1154	1148557	1146632	1926	-			Phage head, head-tail preconnector protease C / Phage head, scaffolding domain Nu3	locus\|Amico_1120, protein_id\|YP_003553968.1, gi\|294102110, InterPro:IPR006433, geneID\|8964064
1155	1150022	1148538	1485	-	-20		Phage head, portal protein B	locus\|Amico_1121, protein_id\|YP_003553969.1, gi\|294102111, InterPro:IPR006429, geneID\|8964065
1156	1150204	1150016	189	-	-7		Phage head, head-tail joining protein W	locus\|Amico_1122, protein_id\|YP_003553970.1, gi\|294102112, geneID\|8964066
1157	1152088	1150223	1866	-	18		Phage terminase, large subunit	locus\|Amico_1123, protein_id\|YP_003553971.1, gi\|294102113, InterPro:IPR008866, geneID\|8964067
1158	1152605	1152081	525	-	-8		hypothetical protein	locus\|Amico_1124, protein_id\|YP_003553972.1, gi\|294102114, geneID\|8964068
1159	1153527	1152964	564	-	358		Phage integrase	locus\|Amico_1125, protein_id\|YP_003553973.1, gi\|294102115, InterPro:IPR002104, geneID\|8964069
1160	1153772	1153569	204	-	41		hypothetical protein	locus\|Amico_1126, protein_id\|YP_003553974.1, gi\|294102116, geneID\|8964070
1161	1154645	1154151	495	-	378		hypothetical protein	locus\|Amico_1127, protein_id\|YP_003553975.1, gi\|294102117, geneID\|8964071
1162	1155028	1154837	192	-	191		hypothetical protein	locus\|Amico_1129, protein_id\|YP_003553977.1, gi\|294102119, geneID\|8964073
1163	1155252	1155034	219	-	5		Two-component transcriptional response regulator, LuxR family
1164	1156177	1155245	933	-	-8		Phage DNA helicase loader	locus\|Amico_1131, protein_id\|YP_003553978.1, gi\|294102120, InterPro:IPR002611, InterPro:IPR003593, geneID\|8964075
1165	1157043	1156174	870	-	-4		hypothetical protein	locus\|Amico_1132, protein_id\|YP_003553979.1, gi\|294102121, geneID\|8964076
1166	1157510	1157073	438	-	29	4: 3 2 4 1	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	locus\|Amico_1133, protein_id\|YP_003553980.1, gi\|294102122, InterPro:IPR008180, InterPro:IPR008181, geneID\|8964077
1167	1157959	1157600	360	-	89		hypothetical protein	locus\|Amico_1134, protein_id\|YP_003553981.1, gi\|294102123, InterPro:IPR001589, geneID\|8964078
1168	1158113	1157970	144	-	10		hypothetical protein	locus\|Amico_1135, protein_id\|YP_003553982.1, gi\|294102124, geneID\|8964079
1169	1158990	1158217	774	-	103		Phage antirepressor protein	locus\|Amico_1136, protein_id\|YP_003553983.1, gi\|294102125, InterPro:IPR003497, InterPro:IPR005039, geneID\|8964080

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Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

Protein Sequence

>fig|572547.3.peg.1159 Phage integrase
MLKYLHKKNFRDYGWVFMGIHVGLRITDLLKLKVKDVLVEKPGGRRQIRTHINIKENKTR
KTRLIKINNPVRDFLREYLTPFKEAEMEYPLFISRKRNKDGSLRSITRQTAYAILKEAKE
ACGIEESVGTHTIRKTWGYWAYKTTKDIAAIQEIYGHNSAKDTLRYICVDQVQKDFIYES
VTFQGIK

MD5 = 5b8889d0d6352c8c304ed223225c9f1a

DNA Sequence

>fig|572547.3.peg.1159 Phage integrase
atgctcaaatatcttcataagaaaaattttagagattacggttgggtttttatgggaata
cacgttgggttgcggataacggatcttctaaaactaaaagtgaaagatgttcttgttgaa
aagcctgggggcagaaggcagattcgaacacacataaacataaaagaaaacaagacaaga
aaaacccgtctcataaagataaataatcccgtcagagattttttaagagaatatctaaca
ccttttaaagaagctgagatggaatatcctctttttatttcacgcaagagaaacaaagat
ggaagtcttagaagcatcaccaggcaaacagcgtacgcaattcttaaagaggcaaaagag
gcctgcggaatagaagaatcagtaggaacacacactatacgtaaaacatggggatactgg
gcttataaaactacaaaagatatagctgccatacaagagatatatggccacaactcagca
aaggacacgcttcgctacatttgcgttgatcaagtccagaaggattttatctatgaaagt
gttaccttccagggaattaaataa

DNA with Flanking Sequence

>fig|572547.3.peg.1159 Phage integrase
gcgtacgtgctggaaaataattaactattcccacaacctactcatagcaaaatacaaagt
aaagaagatgatggaggaaaagaaaaaacaaaaactctaataattccttgaactcaaagt
ccctgataatccgttgatattcccttgatgttccgctgataatcttttaaacactgttaa
aatggtagtatggaaataaatacggaaggccctggcagaaactgtcggggccttttttat
tgagaggtgagcctgatgttcgccatatggggaatacctgaacacaaacgcgtaaggatt
ggagtttcgaacgcgcgtatttcctctatcccctttggtgctgagattattgcccttgta
gagccttgcgatgtgcgattgatgaggcggtggtgtgaacgaagggcgaaacgaaggtgg
tcaatagaaaaaataaggcaggcgtgtggtgggcgatgaacacagttcaaccgcttaaag
atcgaaaacaaatcaaagcgatgctcaaatatcttcataagaaaaattttagagattacg
gttgggtttttatgggaatacacgttgggttgcggataacggatcttctaaaactaaaag
tgaaagatgttcttgttgaaaagcctgggggcagaaggcagattcgaacacacataaaca
taaaagaaaacaagacaagaaaaacccgtctcataaagataaataatcccgtcagagatt
ttttaagagaatatctaacaccttttaaagaagctgagatggaatatcctctttttattt
cacgcaagagaaacaaagatggaagtcttagaagcatcaccaggcaaacagcgtacgcaa
ttcttaaagaggcaaaagaggcctgcggaatagaagaatcagtaggaacacacactatac
gtaaaacatggggatactgggcttataaaactacaaaagatatagctgccatacaagaga
tatatggccacaactcagcaaaggacacgcttcgctacatttgcgttgatcaagtccaga
aggattttatctatgaaagtgttaccttccagggaattaaataagcgatataaataagtt
ttttaataaacgcaaaattaaggcatttataactggcaacaaagcctgtgttcatgcggc
tcgaagttgtagttggcgaatgttacagaacataagttatgtcagattcatataagagga
cttctgaaactttaaggccttcgtaaagcccgttgttgagcaggtttagggggttttggg
tccttcctggagaaaaagactaaggcgggtaaccgaccgcgatgattcccttggtaaaat
tatgaaaaaggggttaaatgtaaaacaacgataacttaatcattaaatatttttagggtc
attaaactaaagtttacagttgggtggaggtgtacaaataaaatgccaaaagccaacatt
aaggttcttaatgatgatgaaatcttgctttcgacaaaacgctgttcggccttttttggc
gtttcaccaaaaaccctgcttgaatggcgaaagatggggtgtcctcaaagatctagggga
tggt

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