Protein Page for fig|572547.3.peg.1157

SEED version cvs.1555556707 (3/17/2019 22:5:7) on aspen.cels.anl.gov

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Protein fig|572547.3.peg.1157: Aminobacterium colombiense DSM 12261

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NCBI Taxonomy Id: 572547

Current Assignment: Phage terminase, large subunit

Translate Function Assignments

Context on contig NC_014011 from base 1144956 to 1157510 (12555 bp)


Fid	Start	End	Size (nt)		Gap	Fc-sc	SS	Function	Aliases
1151	1145399	1144956	444	-				Phage protein	locus\|Amico_1116, protein_id\|YP_003553964.1, gi\|294102106, geneID\|8964060
1152	1145954	1145400	555	-	0			Phage tail, component Z	locus\|Amico_1117, protein_id\|YP_003553965.1, gi\|294102107, geneID\|8964061
1153	1146277	1145951	327	-	-4			Phage protein	locus\|Amico_1118, protein_id\|YP_003553966.1, gi\|294102108, geneID\|8964062
1154	1148557	1146632	1926	-	354	7		Phage head, head-tail preconnector protease C / Phage head, scaffolding domain Nu3	locus\|Amico_1120, protein_id\|YP_003553968.1, gi\|294102110, InterPro:IPR006433, geneID\|8964064
1155	1150022	1148538	1485	-	-20	22		Phage head, portal protein B	locus\|Amico_1121, protein_id\|YP_003553969.1, gi\|294102111, InterPro:IPR006429, geneID\|8964065
1156	1150204	1150016	189	-	-7			Phage head, head-tail joining protein W	locus\|Amico_1122, protein_id\|YP_003553970.1, gi\|294102112, geneID\|8964066
1157	1152088	1150223	1866	-	18			Phage terminase, large subunit	locus\|Amico_1123, protein_id\|YP_003553971.1, gi\|294102113, InterPro:IPR008866, geneID\|8964067
1158	1152605	1152081	525	-	-8			hypothetical protein	locus\|Amico_1124, protein_id\|YP_003553972.1, gi\|294102114, geneID\|8964068
1159	1153527	1152964	564	-	358			Phage integrase	locus\|Amico_1125, protein_id\|YP_003553973.1, gi\|294102115, InterPro:IPR002104, geneID\|8964069
1160	1153772	1153569	204	-	41			hypothetical protein	locus\|Amico_1126, protein_id\|YP_003553974.1, gi\|294102116, geneID\|8964070
1161	1154645	1154151	495	-	378			hypothetical protein	locus\|Amico_1127, protein_id\|YP_003553975.1, gi\|294102117, geneID\|8964071
1162	1155028	1154837	192	-	191			hypothetical protein	locus\|Amico_1129, protein_id\|YP_003553977.1, gi\|294102119, geneID\|8964073
1163	1155252	1155034	219	-	5			Two-component transcriptional response regulator, LuxR family
1164	1156177	1155245	933	-	-8			Phage DNA helicase loader	locus\|Amico_1131, protein_id\|YP_003553978.1, gi\|294102120, InterPro:IPR002611, InterPro:IPR003593, geneID\|8964075
1165	1157043	1156174	870	-	-4			hypothetical protein	locus\|Amico_1132, protein_id\|YP_003553979.1, gi\|294102121, geneID\|8964076
1166	1157510	1157073	438	-	29		4: 4 1 2 3	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	locus\|Amico_1133, protein_id\|YP_003553980.1, gi\|294102122, InterPro:IPR008180, InterPro:IPR008181, geneID\|8964077

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Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

Protein Sequence

>fig|572547.3.peg.1157 Phage terminase, large subunit
MPNWSYQELSVARPPERMTVSEWADRFRVLDRRISAKPGPWRTSFTPYLKDVMDYWTNPE
IEEIVICKAAQSGGTEAALNCLGYSIDQDPSSALIVYPSLEIAEWTSENRIQPMVEASAR
LREKYLHHESDRLELQFPGMYLVLAGANSAASLASRPVRYLIFDEIDKYPPFSGKEASPL
KLGKERTKSFSSNRKILYISTPTLSNKGIWLYMRSSDLILRYYVPCPHCGHLQKLRFPQI
KWPEELTKTYDKLGDNLEERRRIGQQIRDSAWYECEHCTKPIYDKNKPEMLLKGKWRPDE
KATGPVRRVAFHWNSLYAPMLTFGDVAAEFMSSKNLSETLMNFVNSWLAEPWEEKAAALK
SDVVLKAAWTHSRGIVPKGTLVLTAGVDIQKGHMFYVVRAWGERLTSWLVDYGRCENWRE
VEDVVVNRQYRAEDRGDPFQVKLAMIDSGYRTDEVYDFCAIFSDVCKPVKGSSKPLRAPY
SVSTIDKDEFGGLKLWIADGDYYKSLIHGRLRKEPGSYGSWMIFKNCPREYADQICAERK
ITLYDQRTKRTREVWEPISQHAQNHFLDAEVYAAVAADVLGVRYLSAEEREGFLEFSHYE
QESNRQPDEWIPRTEGGWLRV

MD5 = 2247c79d71cc3dbc2764c9f7735db84e

DNA Sequence

>fig|572547.3.peg.1157 Phage terminase, large subunit
ttgcctaattggtcatatcaagaattatcagtagctcggccccctgaacgaatgacggtt
tcggaatgggcagaccgttttagggttttagatcgccgaatatctgctaagccaggaccg
tggcgcactagctttactccatatttgaaagatgttatggattactggaccaatccagaa
atagaagaaatagtgatctgtaaagcagcccaaagcggcggtactgaagccgctctaaat
tgcttaggatattcaatagaccaagatccaagctccgcactaatcgtttacccttctctt
gaaattgcggagtggacgagtgaaaatcgtattcagccgatggttgaagcctcagctcgg
ctgcgtgagaagtatttgcatcatgaatcagatcgcttggagctgcagttcccaggaatg
tacctcgtgttggccggcgcaaatagtgctgcaagtttggctagccggccagttagatat
cttatcttcgatgaaattgataaatacccgccttttagcggaaaagaagcaagtcccctg
aagcttggcaaggagaggacgaaatctttcagtagcaacagaaagatactttatatttct
actcctactttgagtaataagggaatctggctatacatgagatccagcgatttaattttg
cgttattacgtgccatgccctcattgcgggcacctccaaaagcttcgttttcctcaaata
aaatggcctgaagaactaacgaaaacatatgacaagcttggtgacaatcttgaagagcgt
cggagaataggtcaacagattagagactcagcctggtatgaatgtgagcattgcacgaag
cctatatatgacaaaaataaacccgaaatgttattgaaaggaaagtggcgcccagatgaa
aaagcgactggtccggtgcgaagagtcgcttttcattggaattccctatatgcaccaatg
cttacatttggagatgtcgccgccgagttcatgagtagtaaaaatttatctgaaaccctt
atgaactttgtcaactcatggctggcagaaccatgggaagaaaaagcagcagcccttaaa
agcgatgttgtgttgaaagctgcatggactcactccagagggattgttccgaaggggacc
cttgttcttacagctggtgtagacattcaaaaagggcatatgttttacgttgttcgagca
tggggagaacgccttacttcatggctcgttgattatggtcggtgcgaaaattggcgcgag
gtagaagacgttgtggtaaacaggcaatatagagctgaagacagaggagacccgtttcag
gtaaaacttgccatgatagatagtggctacagaacggatgaagtttatgacttttgtgcg
atattttccgatgtgtgcaagccggtaaagggatcttccaagccacttcgagctccttat
tctgtttcaaccatagataaagatgaattcggtggcttaaagctttggatagcagatgga
gattactacaagagtctgattcatgggaggttgcgaaaagagcctggtagctatggatct
tggatgatctttaaaaactgtcctcgcgaatatgctgatcagatttgtgctgagcgtaaa
attacgctctatgaccagagaacgaaacgaacccgggaggtgtgggagcctatttctcaa
cacgcacaaaaccactttttagatgctgaagtttatgctgccgttgcagcagatgtgttg
ggtgttcgttatttatcagcagaggaaagggagggttttctcgagttctcgcactacgag
caagaaagcaatagacaacccgacgaatggatcccgcgaaccgaggggggatggttacga
gtttaa

DNA with Flanking Sequence

>fig|572547.3.peg.1157 Phage terminase, large subunit
taaggttcttaatgatgatgaaatcttgctttcgacaaaacgctgttcggccttttttgg
cgtttcaccaaaaaccctgcttgaatggcgaaagatggggtgtcctcaaagatctagggg
atggtgggatcctgaagcagtgttgcgttggaggacgcaagtaacgtctaaagatggtga
agttgaagaagagaattgggtcgcattaaaaacaaaagcagatgccttatataaacaggc
aaaggcttcacaagaagaaattcggctgcaagagctgaagggtctttacatgaaaaaaga
agaagtctatttggagtgggctaatagattagctgtttgcaaggcaaatatgtttacatg
gtcacgtacacttgctcctatagtgattggtcgtagtttgcgcgaaatagagaaaataat
ctacgacgaaacatatttactatgggaacaatactaccgagaggggccgttcacacctcg
aaacgcagagggtgagagcgttgcctaattggtcatatcaagaattatcagtagctcggc
cccctgaacgaatgacggtttcggaatgggcagaccgttttagggttttagatcgccgaa
tatctgctaagccaggaccgtggcgcactagctttactccatatttgaaagatgttatgg
attactggaccaatccagaaatagaagaaatagtgatctgtaaagcagcccaaagcggcg
gtactgaagccgctctaaattgcttaggatattcaatagaccaagatccaagctccgcac
taatcgtttacccttctcttgaaattgcggagtggacgagtgaaaatcgtattcagccga
tggttgaagcctcagctcggctgcgtgagaagtatttgcatcatgaatcagatcgcttgg
agctgcagttcccaggaatgtacctcgtgttggccggcgcaaatagtgctgcaagtttgg
ctagccggccagttagatatcttatcttcgatgaaattgataaatacccgccttttagcg
gaaaagaagcaagtcccctgaagcttggcaaggagaggacgaaatctttcagtagcaaca
gaaagatactttatatttctactcctactttgagtaataagggaatctggctatacatga
gatccagcgatttaattttgcgttattacgtgccatgccctcattgcgggcacctccaaa
agcttcgttttcctcaaataaaatggcctgaagaactaacgaaaacatatgacaagcttg
gtgacaatcttgaagagcgtcggagaataggtcaacagattagagactcagcctggtatg
aatgtgagcattgcacgaagcctatatatgacaaaaataaacccgaaatgttattgaaag
gaaagtggcgcccagatgaaaaagcgactggtccggtgcgaagagtcgcttttcattgga
attccctatatgcaccaatgcttacatttggagatgtcgccgccgagttcatgagtagta
aaaatttatctgaaacccttatgaactttgtcaactcatggctggcagaaccatgggaag
aaaaagcagcagcccttaaaagcgatgttgtgttgaaagctgcatggactcactccagag
ggattgttccgaaggggacccttgttcttacagctggtgtagacattcaaaaagggcata
tgttttacgttgttcgagcatggggagaacgccttacttcatggctcgttgattatggtc
ggtgcgaaaattggcgcgaggtagaagacgttgtggtaaacaggcaatatagagctgaag
acagaggagacccgtttcaggtaaaacttgccatgatagatagtggctacagaacggatg
aagtttatgacttttgtgcgatattttccgatgtgtgcaagccggtaaagggatcttcca
agccacttcgagctccttattctgtttcaaccatagataaagatgaattcggtggcttaa
agctttggatagcagatggagattactacaagagtctgattcatgggaggttgcgaaaag
agcctggtagctatggatcttggatgatctttaaaaactgtcctcgcgaatatgctgatc
agatttgtgctgagcgtaaaattacgctctatgaccagagaacgaaacgaacccgggagg
tgtgggagcctatttctcaacacgcacaaaaccactttttagatgctgaagtttatgctg
ccgttgcagcagatgtgttgggtgttcgttatttatcagcagaggaaagggagggttttc
tcgagttctcgcactacgagcaagaaagcaatagacaacccgacgaatggatcccgcgaa
ccgaggggggatggttacgagtttaagtagaaaggagggcgtccatgacgtatgaagagg
agcttgctctttatgaagccgctttgcgcgcgatactggcagggcaagagtaccaaatag
gaactatgcggcttaaaagggcaaatattgattatgtgcagaatagaattgactacttac
gccagcaagttgcgatgcagtctacagggtcaaggacatacgtgtcatggtaagaaaggc
tgaagaaataaaacctaatttagtagatcgcgttatatcgtggtttagccctgaaaaggc
atattatcgtatggcctatagacatgctgaacaagagatgcgcaactacaatgcagcaag
gcgagatcgtttcggcagtggctgggaaccagtaaaccaaaagccagaagaaacagatgc
agcttttcgagaccgaataaaggcaagggcaagagatcttgaacgcaatagcgaaattgg
gaatagtgtgttgcttgctcttgagcggaacgtgataggacagggg

  Assignments for Essentially Identical Proteins

No essentially identical proteins found

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  Functional Coupling


Score	Peg	Function
7	fig\|572547.3.peg.1154	Phage head, head-tail preconnector protease C / Phage head, scaffolding domain Nu3
22	fig\|572547.3.peg.1155	Phage head, portal protein B

Attributes

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Protein Families

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