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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|565663.4.peg.1421: Enterococcus faecium Com15

This feature in The SEED Viewer

NCBI Taxonomy Id: 565663

Current Assignment: hypothetical protein
Translate Function Assignments



Context on contig NZ_GG670326 from base 162565 to 174479 (11915 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
1412 162565 163230 666 +           hypothetical protein  
1413 163498 163328 171 - 97         FIG00631288: hypothetical protein  
1414 163823 163485 339 - -14         FIG00628305: hypothetical protein  
1415 164042 163839 204 - 15         hypothetical protein  
1416 164839 164057 783 - 14         Phage antirepressor protein  
1417 164900 165520 621 + 60         hypothetical protein  
1418 166219 166061 159 - 540         hypothetical protein  
1419 166416 166231 186 - 11         cro  
1420 166720 167094 375 + 303         Phage transcriptional regulator, Cro/CI family  
1421 167577 168230 654 + 482         hypothetical protein  
1422 168367 169017 651 + 136         Hypothetical secreted protein  
1423 169127 170266 1140 + 109         Phage integrase  
rna.26 170408 170335 74 - 68         tRNA-Arg-CCT  
1424 170562 170726 165 + 153         FIG00627422: hypothetical protein  
1425 171979 170798 1182 - 71         conserved hypothetical protein  
1426 172516 172103 414 - 123         DNA-directed RNA polymerase specialized sigma subunit, sigma24-like  
1427 172698 172516 183 - -1         FIG00629913: hypothetical protein  
1428 172951 172730 222 - 31         FIG00628773: hypothetical protein  
1429 174479 173019 1461 - 67         PTS system, cellobiose-specific IIC component (EC 2.7.1.69)  

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|565663.4.peg.1421 hypothetical protein
MKKVSVMLLLSTALLLSACSNNKKAESTDATSNQETKVSKTKEATETSSSTSKSTSKTDS
SSTVTSSNQAAAEPSPTVISSSQDTIQTAPQEETYEQMKQRTLQSTPADRANWSNKEWEA
FGVALYENGLTTDDAGNIISQDQKEQQAASQQNPEAQQISAQQDADTLSLTDFVNKYGMS
PVAWKVQNGMSEEEALRTTQQKTSGEVQLGFSKYGIQ

MD5 = 459cdeffee8936aaf261e1e6eb813895


  DNA Sequence

>fig|565663.4.peg.1421 hypothetical protein
atgaaaaaagttagcgttatgttgttgttaagtactgctctgctactttcagcttgttca
aataataaaaaagctgaatcaacagatgccacttctaaccaagaaacaaaagtaagtaaa
acaaaagaagcaactgaaaccagttcctctactagcaaatctacatctaagacagattct
agttcaacagttacaagctccaaccaagctgcggcggaacctagcccaacggttataagc
tccagtcaggatacaatccaaaccgcacctcaagaagaaacatatgaacagatgaaacaa
cgcactttacagtcaactccagctgatcgtgcaaattggtccaacaaagagtgggaagct
ttcggcgtggccctttatgaaaatggattgactacagatgatgctggcaatattatcagt
caagatcagaaagaacaacaagcagcatcacaacaaaatccagaagcccaacaaataagc
gctcagcaagacgctgacactttatcacttactgattttgttaacaaatacgggatgtcg
cctgttgcatggaaagtacagaatggaatgtctgaagaagaagcattgcgtacaacacag
caaaaaacttccggtgaagttcaattaggattttctaaatacggaatacaataa


  DNA with Flanking Sequence

>fig|565663.4.peg.1421 hypothetical protein
aaaggcaaaaagatgtgagcttatggagatggatacgattaatttagtcgaggagttgaa
gcggaaataccagtccgctaatcctttttatatttgtgaaaagatgggcattaaaattca
atacgttccttttatcgagaatcccaaggggcagtttcaagaaattagagatcgtgcgat
aatctttttaaatgatgaactgcgagactctgaggaaagattctacatttgcgctcacga
attaggccacgctatttttcatcgtggcttatccagctattatgtatcaacaagaacatc
tagaagcaaatctgaaagcgaagctaattgctttgctgctaatctcattgtttctcttta
taaagaagataatgatcaatatcctaaaaaaatcgaggaattaaagaatctttacgggct
tccagaaagcgcttatcgttttcttatataaaaaagcccatgttagcacacatattacaa
cgagaaagaggaattataaaatgaaaaaagttagcgttatgttgttgttaagtactgctc
tgctactttcagcttgttcaaataataaaaaagctgaatcaacagatgccacttctaacc
aagaaacaaaagtaagtaaaacaaaagaagcaactgaaaccagttcctctactagcaaat
ctacatctaagacagattctagttcaacagttacaagctccaaccaagctgcggcggaac
ctagcccaacggttataagctccagtcaggatacaatccaaaccgcacctcaagaagaaa
catatgaacagatgaaacaacgcactttacagtcaactccagctgatcgtgcaaattggt
ccaacaaagagtgggaagctttcggcgtggccctttatgaaaatggattgactacagatg
atgctggcaatattatcagtcaagatcagaaagaacaacaagcagcatcacaacaaaatc
cagaagcccaacaaataagcgctcagcaagacgctgacactttatcacttactgattttg
ttaacaaatacgggatgtcgcctgttgcatggaaagtacagaatggaatgtctgaagaag
aagcattgcgtacaacacagcaaaaaacttccggtgaagttcaattaggattttctaaat
acggaatacaataatatatttttgcgtcccactatcttgcctataacctctaaaaagtta
taaagaaaaaagcccgtgctgcaacacggactaaaatctcatttctaagattctacataa
aaataatatcatagaagtgaggaattaaaaatgaaaaaaaacttaatactaggatttatt
tgtactagtattttaactttgggtgcatgtagttcgccttcaaataatgcaactaatagt
gaaactcaaaaaacaatcaatagtttaaaaaaagaaaatgaagagcttaaaaaacaaata
gcatcgcagtcaaatgacactgaagaagatagcgaatctatcgacaatgcttctaaggaa
aaaaccttgccagttgttggtatcctagaatatacaatttcttctataaaaactgaacag
gtaacaaatgacgaagataattttacaaatgccgaatataactttagtggaatagaaaat
tttccagaaaaatactatcgtactactatttctt


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
gb|EEV62096.1 Enterococcus faecium Com15     predicted protein
gi|257837022 Enterococcus faecium Com15 NCBI   predicted protein
gi|257899110 Enterococcus faecium Com15 NCBI   predicted protein
ref|ZP_05678763.1 Enterococcus faecium Com15 RefSeq   predicted protein


  Links to Related Entries in Other Sites

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  Functional Coupling

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  Attributes

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  Protein Families

No protein families found

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