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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|565663.4.peg.1416: Enterococcus faecium Com15

This feature in The SEED Viewer

NCBI Taxonomy Id: 565663

Current Assignment: Phage antirepressor protein
Translate Function Assignments



Context on contig NZ_GG670326 from base 158841 to 170266 (11426 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
1406 159110 158841 270 -           hypothetical protein  
1407 159871 159122 750 - 11         Phage replication initiation  
1408 160560 159874 687 - 2         Phage protein  
1409 161300 160566 735 - 5         Phage protein  
1410 161634 161293 342 - -8         FIG00627384: hypothetical protein  
1411 162510 161812 699 - 177         Uncharacterized phage-encoded protein-like  
1412 162565 163230 666 + 54         hypothetical protein  
1413 163498 163328 171 - 97         FIG00631288: hypothetical protein  
1414 163823 163485 339 - -14         FIG00628305: hypothetical protein  
1415 164042 163839 204 - 15         hypothetical protein  
1416 164839 164057 783 - 14       Phage antirepressor protein  
1417 164900 165520 621 + 60         hypothetical protein  
1418 166219 166061 159 - 540         hypothetical protein  
1419 166416 166231 186 - 11         cro  
1420 166720 167094 375 + 303 4     Phage transcriptional regulator, Cro/CI family  
1421 167577 168230 654 + 482         hypothetical protein  
1422 168367 169017 651 + 136         Hypothetical secreted protein  
1423 169127 170266 1140 + 109         Phage integrase  

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|565663.4.peg.1416 Phage antirepressor protein
MNTPQIFNFEQNEVRTVLVNNEPYFVGKDVAEILGYSDSSSAVSKNVDNEDRTTLLLEQA
GSNYKSKTTIINESGLYSLILKSKLPSAKKFKRWVTSEVLPTIRKHGGYLTPEKVEEALL
NPDTIIQLATQLKEERTGRLIAEQKIAEYEPKISYLDSILSSTDSVTISQIAADYGMSPQ
QMNKLLHKLGIQKKVGNQWLLCKKHMNQGYTKSHTTEIPKADGGTKIVMNTKWTQKGRLF
IYELLKKEGYYPQMDLEEIG

MD5 = 497664b6aff82a00d51f1ddbe2eef1c9


  DNA Sequence

>fig|565663.4.peg.1416 Phage antirepressor protein
atgaacacaccacaaatttttaacttcgaacaaaatgaagttcgaacagttttagtaaat
aatgaaccgtattttgtaggtaaagatgtagctgagattcttggatacagcgattcatct
agcgcagtttcaaaaaatgttgataacgaggatagaaccacattgcttttagagcaagct
ggttcaaattataaatccaaaacgacaattatcaacgagtcaggtctttacagtttaatc
ttaaaatcaaaacttccttctgccaaaaaattcaaacgatgggtaacaagtgaagttctt
ccaacaattagaaaacatggaggttatctaactccagaaaaagtagaagaagctttgctt
aatccagatacaatcattcaattagcaactcaactaaaagaagaaagaactggaagatta
atcgcagaacaaaagattgcagagtacgaacctaaaatctcctatttagatagcatatta
tcttctacagattcagtaacaattagtcagattgcagcagattatgggatgtctccacaa
cagatgaataaattacttcataaactaggtattcagaaaaaagtcggtaaccaatggtta
ttgtgcaaaaaacacatgaaccaaggatacacaaaatctcatacaactgagatcccgaaa
gccgatggtggcactaaaattgtaatgaataccaaatggacacagaaagggcgtctattt
atctacgaattactaaaaaaagaaggatattaccctcaaatggatttagaggaaattggt
tag


  DNA with Flanking Sequence

>fig|565663.4.peg.1416 Phage antirepressor protein
ggtgaaataactaaatctattgatgtgagtgaatgtgcctttacaattccagagttacca
ctgggtaagtttaactcttgaaattcattatctttatcaagcattattattgcttttgaa
ttttgaagttcattaaatatatgagtttgtttttgattgtaataatgcaacgcttctttg
gatagagaatcgattacagccaagtcaaaaaaactaatatctgtgtttgaagaatttatg
atacgaatatttgtttttaaaaatccaaaatcgttgatggatgattttccgtcatcatac
aataacgcaattccccactgcggttctgaagtagtttcaagttctaaattaatttggttc
tttattattgtataagtcaccgttaaacaagaaataattaatgaggcaatagctatccag
tttgtcaataaataattcataagaatttacaccatccaaaacatttttatataagtatat
caaagaaaggaatgaaaaaaatgaacacaccacaaatttttaacttcgaacaaaatgaag
ttcgaacagttttagtaaataatgaaccgtattttgtaggtaaagatgtagctgagattc
ttggatacagcgattcatctagcgcagtttcaaaaaatgttgataacgaggatagaacca
cattgcttttagagcaagctggttcaaattataaatccaaaacgacaattatcaacgagt
caggtctttacagtttaatcttaaaatcaaaacttccttctgccaaaaaattcaaacgat
gggtaacaagtgaagttcttccaacaattagaaaacatggaggttatctaactccagaaa
aagtagaagaagctttgcttaatccagatacaatcattcaattagcaactcaactaaaag
aagaaagaactggaagattaatcgcagaacaaaagattgcagagtacgaacctaaaatct
cctatttagatagcatattatcttctacagattcagtaacaattagtcagattgcagcag
attatgggatgtctccacaacagatgaataaattacttcataaactaggtattcagaaaa
aagtcggtaaccaatggttattgtgcaaaaaacacatgaaccaaggatacacaaaatctc
atacaactgagatcccgaaagccgatggtggcactaaaattgtaatgaataccaaatgga
cacagaaagggcgtctatttatctacgaattactaaaaaaagaaggatattaccctcaaa
tggatttagaggaaattggttagaaaggagttttagtatgactgacattgcagaaatcac
tcaacgagatagagaaaaaatcaaagaatatgtcgaaagttcaaagttcttaacttacac
catgcttgctgaaagatttggaattagcaaaagctacttatctttaattttaaacggtaa
aaagacttctgcagaagcaaacagaattatagattcgattatcactatgtacgaattgta
aagggaggaacagctaatgcaatatctagaagcaaaaatcccaattccagaaggctatgt
aattatctcccaagtggattatgaggagttaaaaaaagctgatgatactggtagatggat
gacgttgccagaagtgctagaacggattaacagaaaatatgattggtttacttctagagt
tttaaagaacccaagatatagaaatattatcgatatcgaaaaaaacaaaaatggatttgt
ctattatccagttgaaggaagagacacatatctatttttaaga


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
gb|EEV62089.1 Enterococcus faecium Com15     BRO
gi|257837015 Enterococcus faecium Com15 NCBI   BRO
gi|257899103 Enterococcus faecium Com15 NCBI   BRO
ref|ZP_05678756.1 Enterococcus faecium Com15 RefSeq   BRO


  Links to Related Entries in Other Sites

This PEG has no links.
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  Functional Coupling

Score Peg Function
4 fig|565663.4.peg.1420 Phage transcriptional regulator, Cro/CI family


  Attributes

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  Protein Families

No protein families found

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