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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|565663.4.peg.1408: Enterococcus faecium Com15

This feature in The SEED Viewer

NCBI Taxonomy Id: 565663

Current Assignment: Phage protein
Translate Function Assignments


Context on contig NZ_GG670326 from base 155044 to 165520 (10477 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
1395 155196 155044 153 -           hypothetical protein  
1396 155737 155456 282 - 259         Phage transcriptional activator ArpU  
1397 156121 155963 159 - 225         hypothetical protein  
1398 156410 156111 300 - -11         FIG00631129: hypothetical protein  
1399 156610 156407 204 - -4         hypothetical protein  
1400 157319 156624 696 - 13         C-5 cytosine-specific DNA methylase  
1401 157777 157355 423 - 35         FIG00631830: hypothetical protein  
1402 157917 157774 144 - -4         hypothetical protein  
1403 158216 157917 300 - -1         FIG00631516: hypothetical protein  
1404 158380 158219 162 - 2         FIG00630198: hypothetical protein  
1405 158836 158672 165 - 291         FIG00632008: hypothetical protein  
1406 159110 158841 270 - 4         hypothetical protein  
1407 159871 159122 750 - 11         Phage replication initiation  
1408 160560 159874 687 - 2         Phage protein  
1409 161300 160566 735 - 5         Phage protein  
1410 161634 161293 342 - -8         FIG00627384: hypothetical protein  
1411 162510 161812 699 - 177         Uncharacterized phage-encoded protein-like  
1412 162565 163230 666 + 54         hypothetical protein  
1413 163498 163328 171 - 97         FIG00631288: hypothetical protein  
1414 163823 163485 339 - -14         FIG00628305: hypothetical protein  
1415 164042 163839 204 - 15         hypothetical protein  
1416 164839 164057 783 - 14         Phage antirepressor protein  
1417 164900 165520 621 + 60         hypothetical protein  

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|565663.4.peg.1408 Phage protein
MFKPLIDSYSAVLKKFKGKDIGATINEEVNIERLKTMYDGYDGDRVIEIRFIDPRRFTVQ
QRNFIYALIGDIFIDTGMPTDFWKEFFYFRFEGVTGRKISLKDESNTTVSDANVLANIIL
DFIFEHHIPFKEGYEILPANQEYYFYKCITKRVCCICGKTGADIDHFDKALGRRKRKEVD
HSEYTFAALCRIHHTEKHKIGVINFKNKYQIKGIKLNQKTIKKLNIGG

MD5 = e3e1af6dea91324b04d7edbf38e41c86


  DNA Sequence

>fig|565663.4.peg.1408 Phage protein
gtgtttaaaccattaatcgattcatattcagcagttctgaaaaagttcaaagggaaagac
ataggcgcaaccatcaatgaggaagtgaacatcgagcgactaaagacgatgtatgacggc
tatgacggtgatcgagtcatcgaaataagatttattgatcctagacgtttcactgtacag
caacgaaacttcatctatgcgctcataggcgatatttttatcgatacaggaatgccaacg
gacttctggaaggaattcttctacttccgttttgaaggcgtcacagggcgcaaaataagc
ctcaaagacgaatcgaatacaactgtgagtgatgctaatgtcttagcaaatatcatctta
gatttcatctttgaacatcatattcctttcaaagaaggctatgagattttaccagcgaat
caagagtattacttctacaaatgcatcacaaaaagagtctgctgcatctgtggcaaaaca
ggagctgatatcgatcactttgataaagcgttaggaagacgaaagcgcaaagaagttgat
cattcagagtacacatttgcagcactctgcagaatccatcacacagagaagcacaaaata
ggtgtgattaatttcaaaaataaatatcaaatcaaagggatcaaattaaaccagaaaaca
atcaaaaagttaaatattggagggtaa


  DNA with Flanking Sequence

>fig|565663.4.peg.1408 Phage protein
aacggagtaaagcgtgacatgtggttaccagtcatggatggtgcaaacaaggcaatgaaa
gatgagccatatacctacgaagtcaatgattatcagtggaataacgaaacgaagaaaaaa
gagattgttggaaaaatcgaaaagcgagttgaagcagcaactatgtttgatatcaacaaa
acgatcatgcgctgtcttgtaaaaaatctagcaatgtttgggctagggctatatatattt
gctggcgaagatatgccagaagatgtctcgatgcttgaaccagctactcaaagaagcaaa
aagctattcttggatgctttacaactggttgctaacaagtacgagaaatcaattgatgaa
gcaattgttgcgttgactgatgcggcttctataaccgctgatgacagtaaatggaccaag
agagacttgggcattctaaaacgaggcgttaattggcttgaagatcagtacagagacgaa
acaaaagagaagtgatatgagtgtttaaaccattaatcgattcatattcagcagttctga
aaaagttcaaagggaaagacataggcgcaaccatcaatgaggaagtgaacatcgagcgac
taaagacgatgtatgacggctatgacggtgatcgagtcatcgaaataagatttattgatc
ctagacgtttcactgtacagcaacgaaacttcatctatgcgctcataggcgatattttta
tcgatacaggaatgccaacggacttctggaaggaattcttctacttccgttttgaaggcg
tcacagggcgcaaaataagcctcaaagacgaatcgaatacaactgtgagtgatgctaatg
tcttagcaaatatcatcttagatttcatctttgaacatcatattcctttcaaagaaggct
atgagattttaccagcgaatcaagagtattacttctacaaatgcatcacaaaaagagtct
gctgcatctgtggcaaaacaggagctgatatcgatcactttgataaagcgttaggaagac
gaaagcgcaaagaagttgatcattcagagtacacatttgcagcactctgcagaatccatc
acacagagaagcacaaaataggtgtgattaatttcaaaaataaatatcaaatcaaaggga
tcaaattaaaccagaaaacaatcaaaaagttaaatattggagggtaaaaatgacagaaca
tcgaagttattatgcgattataccagccaacgtaaggtacgacaaaagacttaaaccaaa
tactaagttgttatacggagagataacggccttgtgtaatgaaagaggcttttgttgggc
aggcaatgagtactttgcagatttatatggtgtgaataaagagaccatatcgcgatgggt
aagtgatttgattaagtttggatacttgaatcgggaaatcatttacaaagagggtaccaa
tcaaataatcaataggtacctacgaattaatcaataccctattgacgaaaaacgcaatac
ccctattgacgaaaaagtcaaagataataatacatctattaataatacatttaataatac
aaaagaatatataagagagttaccgccttcgaaaaaatcgaaggctaagcccgtccgtca
taaatacggagaatataaaaatgttcttttgtcagatgagcagatggagaaactcaaaac
agaattc


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
gb|EEV62080.1 Enterococcus faecium Com15     conserved hypothetical protein
gi|257837006 Enterococcus faecium Com15 NCBI   conserved hypothetical protein
gi|257899094 Enterococcus faecium Com15 NCBI   conserved hypothetical protein
ref|ZP_05678747.1 Enterococcus faecium Com15 RefSeq   conserved hypothetical protein


  Links to Related Entries in Other Sites

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  Functional Coupling

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  Attributes

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  Protein Families

No protein families found

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