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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|565663.4.peg.1407: Enterococcus faecium Com15

This feature in The SEED Viewer

NCBI Taxonomy Id: 565663

Current Assignment: Phage replication initiation
Translate Function Assignments



Context on contig NZ_GG670326 from base 153987 to 164839 (10853 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
1394 154199 153987 213 -           hypothetical protein  
1395 155196 155044 153 - 844         hypothetical protein  
1396 155737 155456 282 - 259         Phage transcriptional activator ArpU  
1397 156121 155963 159 - 225         hypothetical protein  
1398 156410 156111 300 - -11         FIG00631129: hypothetical protein  
1399 156610 156407 204 - -4         hypothetical protein  
1400 157319 156624 696 - 13         C-5 cytosine-specific DNA methylase  
1401 157777 157355 423 - 35         FIG00631830: hypothetical protein  
1402 157917 157774 144 - -4         hypothetical protein  
1403 158216 157917 300 - -1         FIG00631516: hypothetical protein  
1404 158380 158219 162 - 2         FIG00630198: hypothetical protein  
1405 158836 158672 165 - 291         FIG00632008: hypothetical protein  
1406 159110 158841 270 - 4         hypothetical protein  
1407 159871 159122 750 - 11         Phage replication initiation  
1408 160560 159874 687 - 2         Phage protein  
1409 161300 160566 735 - 5         Phage protein  
1410 161634 161293 342 - -8         FIG00627384: hypothetical protein  
1411 162510 161812 699 - 177         Uncharacterized phage-encoded protein-like  
1412 162565 163230 666 + 54         hypothetical protein  
1413 163498 163328 171 - 97         FIG00631288: hypothetical protein  
1414 163823 163485 339 - -14         FIG00628305: hypothetical protein  
1415 164042 163839 204 - 15         hypothetical protein  
1416 164839 164057 783 - 14         Phage antirepressor protein  

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|565663.4.peg.1407 Phage replication initiation
MTEHRSYYAIIPANVRYDKRLKPNTKLLYGEITALCNERGFCWAGNEYFADLYGVNKETI
SRWVSDLIKFGYLNREIIYKEGTNQIINRYLRINQYPIDEKRNTPIDEKVKDNNTSINNT
FNNTKEYIRELPPSKKSKAKPVRHKYGEYKNVLLSDEQMEKLKTEFPDDYQERIERLSEY
CESSGKTYKNYLATIRSWARKEKSEPKNASSGYKRTGRREKLPEWAIDQEAYQKKKALER
ANRQSKAPF

MD5 = bcd25a062835c36533ff3b31b7589806


  DNA Sequence

>fig|565663.4.peg.1407 Phage replication initiation
atgacagaacatcgaagttattatgcgattataccagccaacgtaaggtacgacaaaaga
cttaaaccaaatactaagttgttatacggagagataacggccttgtgtaatgaaagaggc
ttttgttgggcaggcaatgagtactttgcagatttatatggtgtgaataaagagaccata
tcgcgatgggtaagtgatttgattaagtttggatacttgaatcgggaaatcatttacaaa
gagggtaccaatcaaataatcaataggtacctacgaattaatcaataccctattgacgaa
aaacgcaatacccctattgacgaaaaagtcaaagataataatacatctattaataataca
tttaataatacaaaagaatatataagagagttaccgccttcgaaaaaatcgaaggctaag
cccgtccgtcataaatacggagaatataaaaatgttcttttgtcagatgagcagatggag
aaactcaaaacagaattccctgatgattaccaagagcgaatcgaacgactgtcagagtat
tgtgaatcatctggtaagacttataaaaactatttggcaactattcgaagttgggcaagg
aaagaaaaaagtgaacctaagaacgcaagcagtggatacaagcgcacaggaagacgagag
aagcttccagaatgggcaatcgaccaagaagcctatcaaaagaaaaaagcgctagaacga
gctaatagacaatcaaaagcaccattctaa


  DNA with Flanking Sequence

>fig|565663.4.peg.1407 Phage replication initiation
ttcatctatgcgctcataggcgatatttttatcgatacaggaatgccaacggacttctgg
aaggaattcttctacttccgttttgaaggcgtcacagggcgcaaaataagcctcaaagac
gaatcgaatacaactgtgagtgatgctaatgtcttagcaaatatcatcttagatttcatc
tttgaacatcatattcctttcaaagaaggctatgagattttaccagcgaatcaagagtat
tacttctacaaatgcatcacaaaaagagtctgctgcatctgtggcaaaacaggagctgat
atcgatcactttgataaagcgttaggaagacgaaagcgcaaagaagttgatcattcagag
tacacatttgcagcactctgcagaatccatcacacagagaagcacaaaataggtgtgatt
aatttcaaaaataaatatcaaatcaaagggatcaaattaaaccagaaaacaatcaaaaag
ttaaatattggagggtaaaaatgacagaacatcgaagttattatgcgattataccagcca
acgtaaggtacgacaaaagacttaaaccaaatactaagttgttatacggagagataacgg
ccttgtgtaatgaaagaggcttttgttgggcaggcaatgagtactttgcagatttatatg
gtgtgaataaagagaccatatcgcgatgggtaagtgatttgattaagtttggatacttga
atcgggaaatcatttacaaagagggtaccaatcaaataatcaataggtacctacgaatta
atcaataccctattgacgaaaaacgcaatacccctattgacgaaaaagtcaaagataata
atacatctattaataatacatttaataatacaaaagaatatataagagagttaccgcctt
cgaaaaaatcgaaggctaagcccgtccgtcataaatacggagaatataaaaatgttcttt
tgtcagatgagcagatggagaaactcaaaacagaattccctgatgattaccaagagcgaa
tcgaacgactgtcagagtattgtgaatcatctggtaagacttataaaaactatttggcaa
ctattcgaagttgggcaaggaaagaaaaaagtgaacctaagaacgcaagcagtggataca
agcgcacaggaagacgagagaagcttccagaatgggcaatcgaccaagaagcctatcaaa
agaaaaaagcgctagaacgagctaatagacaatcaaaagcaccattctaagaggtggaaa
attgaaaatcgattatctagaactgatcaatgaaatagcaagttacaaaactggtgagga
aatagagattctgagagacgtttatgaacaacttgatgaagctggaatcgaacgaattaa
gaatgatcgttcaagttggagtaaactcagatactatttcgcactttatatcgatgcaac
acaattaagaaatttagcttatacaaaattactatttgttgattgcgttaaaggattgca
aaaacatcttagtgaacttgagcaggtgtaatcagatggatctaaaaacatttacagcac
agatcgaactaatgcatcaagaagctttaagacaaagcgcctcgtacgaagacaagtggc
tcaacacgttccatggtggacgtgagagcgcacttgatcaagtactcaaattattgaaag
gggaacgtcgggatggataagaaagcggcaatgcagcgaattatcgaattgacttattca
gaagattggc


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
gb|EEV62079.1 Enterococcus faecium Com15     conserved hypothetical protein
gi|257837005 Enterococcus faecium Com15 NCBI   conserved hypothetical protein
gi|257899093 Enterococcus faecium Com15 NCBI   conserved hypothetical protein
ref|ZP_05678746.1 Enterococcus faecium Com15 RefSeq   conserved hypothetical protein


  Links to Related Entries in Other Sites

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  Functional Coupling

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  Attributes

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  Protein Families

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